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CAZyme Information: MGYG000003090_01053

You are here: Home > Sequence: MGYG000003090_01053

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-988 sp003149915
Lineage Bacteria; Firmicutes; Bacilli; RF39; UBA660; CAG-988; CAG-988 sp003149915
CAZyme ID MGYG000003090_01053
CAZy Family CBM50
CAZyme Description D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
268 29201.19 7.1547
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003090 1480560 MAG Spain Europe
Gene Location Start: 12490;  End: 13296  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003090_01053.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM50 4 46 4.7e-16 0.975

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK06347 PRK06347 1.49e-41 48 266 324 592
1,4-beta-N-acetylmuramoylhydrolase.
PRK06347 PRK06347 1.10e-26 2 149 406 591
1,4-beta-N-acetylmuramoylhydrolase.
PRK10783 mltD 9.15e-18 2 92 344 444
membrane-bound lytic murein transglycosylase D; Provisional
PRK10783 mltD 4.35e-17 108 200 346 444
membrane-bound lytic murein transglycosylase D; Provisional
PRK10783 mltD 2.35e-16 141 263 322 444
membrane-bound lytic murein transglycosylase D; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AXY24739.1 1.71e-39 4 267 604 885
QIL47903.1 2.14e-38 2 265 761 1001
QER42489.1 4.25e-36 4 265 60 326
AGK53921.1 1.24e-35 3 265 100 322
AYA76518.1 1.25e-35 4 265 98 373

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4B8V_A 1.28e-11 102 261 38 212
ChainA, Extracellular Protein 6 [Fulvia fulva],4B9H_A Chain A, Extracellular Protein 6 [Fulvia fulva]
4UZ2_A 9.82e-10 104 153 1 50
Crystalstructure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_B Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_C Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_D Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ3_A Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8],4UZ3_B Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8],4UZ3_C Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8]
4XCM_A 2.73e-07 108 153 5 50
Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O31852 1.63e-30 2 268 27 271
D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1
P54421 1.76e-29 110 266 30 193
Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1
O07532 4.89e-25 3 265 28 283
Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2
P37710 5.18e-22 4 267 363 610
Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2
Q5HRU2 5.07e-20 96 265 17 190
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=sle1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003090_01053.