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CAZyme Information: MGYG000003094_00479

You are here: Home > Sequence: MGYG000003094_00479

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola barnesiae
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola barnesiae
CAZyme ID MGYG000003094_00479
CAZy Family GH3
CAZyme Description Beta-glucosidase BoGH3B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
784 MGYG000003094_6|CGC2 85264.31 5.9179
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003094 3093382 MAG Spain Europe
Gene Location Start: 68048;  End: 70402  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003094_00479.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 125 352 2.3e-71 0.9814814814814815

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 0.0 1 782 1 763
beta-glucosidase BglX.
COG1472 BglX 2.75e-100 45 473 1 387
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PLN03080 PLN03080 2.04e-95 128 769 78 769
Probable beta-xylosidase; Provisional
pfam00933 Glyco_hydro_3 2.29e-77 107 384 42 316
Glycosyl hydrolase family 3 N terminal domain.
pfam01915 Glyco_hydro_3_C 1.18e-68 422 667 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRO24329.1 0.0 3 784 2 787
ADV43485.1 0.0 23 783 22 781
QEW35133.1 0.0 14 781 17 783
QQY39447.1 0.0 14 781 19 785
ABR38266.1 0.0 14 781 17 783

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5YOT_A 2.90e-143 21 784 1 757
Isoprimeverose-producingenzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YOT_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_A Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40]
7EAP_A 2.25e-142 21 784 1 757
ChainA, Fn3_like domain-containing protein [Aspergillus oryzae RIB40]
5Z87_A 3.87e-134 8 775 17 777
ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
5TF0_A 2.34e-133 36 775 10 743
CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]
5XXL_A 3.51e-131 36 772 11 741
Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56078 8.10e-139 38 783 38 764
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363 3.46e-137 38 783 38 764
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
T2KMH9 1.05e-132 27 784 29 755
Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1
T2KMH0 6.41e-132 95 778 29 716
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
Q23892 9.21e-94 38 778 80 821
Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000242 0.999175 0.000159 0.000148 0.000135 0.000132

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003094_00479.