CAZyme Information: MGYG000003094_01294

Basic Information

• Species: Phocaeicola barnesiae
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola barnesiae
• CAZyme ID: MGYG000003094_01294
• CAZy Family: GH110
• CAZyme Description: Alpha-1,3-galactosidase B

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
593	MGYG000003094_22|CGC1	67401.4	6.8085

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003094	3093382	MAG	Spain	Europe

• Gene Location: Start: 11234; End: 13015 Strand: +

Full Sequence      

MKRNILLPFLWLFGCLFAWSQTHVYEMSDFGIIPGKKTNLSGKMEKALQKIRKQTSENDS
IVLRFEPGTYHFHPKGAAIREYYVSNHDQVASKSIGLALDEFHSLTLEGNGAQFIFHGRM
LPLALTHSSNCTLKDFSIDHANPQIAQAEIVSNDPEQGITFRVAPWVNYRITQDSLFETY
GEGWALRQSAGIAFEKETRRVCYNTSDIGVPTKGVTEIEPGLLRAPRWKDKRLAPGTVMA
LRTWERPTPGIFLSHNTQTTLKNVTVHYAEGMGLLAQLCEDITLDGFNVCLKGKDDPRYF
TTQADATHFSQCKGKITSVNGLYENMMDDAINVHGTYLKILERIDNHTVRGRYMHDQAWG
FDWGFAGDSVKFIRTRTMDMEKEVYTIAEIRPHDKPQITGAREFVITFKEELSPSMTPEA
SYGIENLTWTPEVYFAHNTVRHNRARGSLFSTPKRTVVEENLFDHTSGTAILLCGDCNGW
FETGACHDVLIRKNKFINALTNLFQFTNAVISIYPEIPDLNGQTTYFHGGKPGAIQIVDN
EFDTFDAPILYAKSVDGLVFKQNIIRTNTDYPPFHWNHNRFLLERVNRVEISE

Enzyme Prediction     

EC	3.2.1.-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH110	24	593	5.1e-219	0.9963503649635036

CDD Domains     

MGYG000003094_01294 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRO24974.1	0.0	1	593	1	592
EDY94243.1	0.0	15	593	15	592
BAD47674.1	1.43e-297	20	593	22	595
CAH06588.1	2.03e-297	20	593	22	595
QCQ40591.1	2.03e-297	20	593	22	595

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7JW4_A	1.73e-72	20	592	23	593	Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A	9.12e-72	20	592	23	593	Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q64XV2	2.85e-298	20	593	22	595	Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaB PE=3 SV=1
Q5LGZ8	4.05e-298	20	593	22	595	Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaB PE=1 SV=1
A6KWM0	1.53e-292	20	593	19	592	Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB1 PE=3 SV=1
A6L2M8	6.21e-269	1	593	1	592	Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB2 PE=3 SV=1
A6LFT2	5.69e-252	12	592	15	589	Alpha-1,3-galactosidase B OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=glaB PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.012745	0.397764	0.588651	0.000238	0.000262	0.000331

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003094_01294.