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CAZyme Information: MGYG000003097_01657

You are here: Home > Sequence: MGYG000003097_01657

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp000436795
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp000436795
CAZyme ID MGYG000003097_01657
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1060 MGYG000003097_15|CGC1 121975.69 6.459
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003097 3921942 MAG Spain Europe
Gene Location Start: 46048;  End: 49230  Strand: +

Full Sequence      Download help

MKKHFFYITY  LLAFTATLPA  QADNVPWQNP  QINEINREPM  HAHFLPFIDE  NAALAQQALP60
DLQRFEINAR  TERRISLNGT  WKFLFSKNND  ACPADFHKPG  YSTRKWKDIK  VPGSWELQGF120
DAPIYTDVSY  PFPCNPPYVP  ADYNPVGAYI  REFSVPESWN  GMDIFLDFEG  VESAYYCWVN180
GELAGYSEDS  RLPAHFNVTK  LLKKGKNKLA  VKVFRYSDGS  YMEDQDYWKY  SGIERDVYLY240
ARPQSRVKDF  KLTAGLINQY  KDGDFDINIL  LNQPQQGQHV  EFKILDTKGK  TIYTQEKEIK300
SSSDTLLSGN  KLIKGAQAWN  AETPNLYTLV  VNTFDKQGKP  MESFAHPFGF  RTIEMKNGQQ360
LINGVPVLFK  GVNRHEHDPY  TGRSIDVASM  LTDIRLMKQF  NINAVRNCHY  PDHYQWYALC420
DKYGLYLVGE  ANIESHGMMS  HKDGTLANYP  EWEPAFMQRM  SRMVTRDRNC  TAIVTWSLGN480
ESGYGKHFET  IYNWTKETDP  TRPVQYEGGG  YEAKSDIYCP  MYPRIWSLRR  HINQRDARPM540
IMCEYAHAMG  NSVGNLQDYW  DLIYKYDQLQ  GGFIWDWVDQ  TFAKKDEKGK  NIWAYGGDMG600
YVGVHNDSNF  CANGLVAADR  SLHPHIYEVK  KVYQYIHFRP  VAFTANRINV  TNWHDFIDLS660
GYRLRWTIEA  DGKNIQQGIM  DFPMIAARQS  REIVIPMHAI  TASEKEYFLK  LEAITRQDAP720
MIPAGHVAAM  EQWELPVEHT  AQNIEFVDGT  LTAERTPESI  NLNGTNFRIC  FSTTNGEMTA780
LEFNGKNLIK  EGLQANFWRG  LTDNDVANGT  PERCRTWQKA  GENARLKDLN  LKESTDKHQA840
IVCALYRMEE  QDADLSINYI  IRPDGVVKVT  MSFVPGQKEL  PEMPRLGMRM  VLPAEYEIMT900
WLGRGPHENY  SDRKNSAAIG  LYTANVWEQY  HPYVRAQETA  NKCDVRWVAL  RNQQGEGLLV960
TGEEPLSVSA  WNFPLEDIGY  RPFNIERRHG  GSIEKQDLVW  LNIDHLQMGV  GGDNTWGAQV1020
HPEYTITPHA  WQYSFTIQPL  NAKTDAAQQA  HKKFFNDNIQ  1060

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Created with Snap53106159212265318371424477530583636689742795848901954100767919GH2
Family Start End Evalue family coverage
GH2 67 919 1.8e-222 0.9694148936170213

CDD Domains      download full data without filtering help

Created with Snap531061592122653183714244775305836366897427958489019541007271039lacZ271054ebgA66920LacZ7641037Bgal_small_N353638Glyco_hydro_2_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09525 lacZ 0.0 27 1039 17 1026
beta-galactosidase.
PRK10340 ebgA 0.0 27 1054 4 1015
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 5.31e-164 66 920 4 807
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
smart01038 Bgal_small_N 2.61e-104 764 1037 2 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.
pfam02836 Glyco_hydro_2_C 6.79e-104 353 638 1 302
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Created with Snap53106159212265318371424477530583636689742795848901954100711055ADY37312.1|GH231055ALK84235.1|GH231055ABR39054.1|GH231055QQY39154.1|GH291055QJR75046.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37312.1 0.0 1 1055 1 1051
ALK84235.1 0.0 3 1055 2 1058
ABR39054.1 0.0 3 1055 2 1058
QQY39154.1 0.0 3 1055 2 1058
QJR75046.1 0.0 9 1055 7 1058

PDB Hits      download full data without filtering help

Created with Snap5310615921226531837142447753058363668974279584890195410072710386S6Z_A2710386SD0_A2710403DEC_A2710403BGA_A2710331PX3_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 7.45e-258 27 1038 4 980
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 7.68e-258 27 1038 5 981
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DEC_A 2.90e-221 27 1040 7 997
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 9.56e-219 27 1040 10 1001
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
1PX3_A 1.22e-198 27 1033 16 1016
ChainA, beta-galactosidase [Escherichia coli],1PX3_B Chain B, beta-galactosidase [Escherichia coli],1PX3_C Chain C, beta-galactosidase [Escherichia coli],1PX3_D Chain D, beta-galactosidase [Escherichia coli],1PX4_A Chain A, beta-galactosidase [Escherichia coli],1PX4_B Chain B, beta-galactosidase [Escherichia coli],1PX4_C Chain C, beta-galactosidase [Escherichia coli],1PX4_D Chain D, beta-galactosidase [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Created with Snap531061592122653183714244775305836366897427958489019541007271038sp|Q56307|BGAL_THEMA141040sp|O52847|BGAL_PRIM3271038sp|A5F5U6|BGAL_VIBC3271037sp|A1SWB8|BGAL_PSYIN271039sp|Q6LL68|BGAL_PHOPR
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56307 4.21e-257 27 1038 5 981
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847 1.74e-251 14 1040 8 1034
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
A5F5U6 2.23e-217 27 1038 13 1017
Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lacZ PE=3 SV=2
A1SWB8 1.90e-215 27 1037 13 1032
Beta-galactosidase OS=Psychromonas ingrahamii (strain 37) OX=357804 GN=lacZ PE=3 SV=1
Q6LL68 9.10e-215 27 1039 12 1027
Beta-galactosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000515 0.998589 0.000264 0.000231 0.000207 0.000193

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003097_01657.