Species | Phocaeicola sp000436795 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp000436795 | |||||||||||
CAZyme ID | MGYG000003097_02212 | |||||||||||
CAZy Family | GH28 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
|
|||||||||||
Genome Property |
|
|||||||||||
Gene Location | Start: 1079; End: 2527 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH28 | 88 | 471 | 1.9e-84 | 0.9569230769230769 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG5434 | Pgu1 | 2.89e-94 | 53 | 385 | 73 | 393 | Polygalacturonase [Carbohydrate transport and metabolism]. |
pfam00295 | Glyco_hydro_28 | 1.13e-26 | 90 | 424 | 1 | 274 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
PLN02188 | PLN02188 | 3.13e-16 | 60 | 369 | 34 | 287 | polygalacturonase/glycoside hydrolase family protein |
PLN02218 | PLN02218 | 1.68e-13 | 64 | 424 | 69 | 379 | polygalacturonase ADPG |
PLN03003 | PLN03003 | 7.75e-13 | 90 | 354 | 51 | 257 | Probable polygalacturonase At3g15720 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
ADY37152.1 | 5.93e-288 | 33 | 480 | 18 | 465 |
QDO70927.1 | 1.07e-269 | 23 | 482 | 7 | 467 |
QUT90781.1 | 1.76e-268 | 23 | 482 | 7 | 467 |
ALJ58201.1 | 1.76e-268 | 23 | 482 | 7 | 467 |
QUT76979.1 | 1.83e-268 | 30 | 482 | 16 | 467 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3JUR_A | 5.49e-110 | 41 | 451 | 9 | 408 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
5OLP_A | 5.51e-89 | 51 | 479 | 33 | 451 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
2UVE_A | 3.93e-23 | 55 | 428 | 149 | 532 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
4MXN_A | 2.13e-09 | 58 | 174 | 17 | 122 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
A7PZL3 | 1.73e-36 | 94 | 448 | 96 | 424 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
P27644 | 5.51e-28 | 237 | 385 | 30 | 181 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
P15922 | 2.90e-20 | 56 | 470 | 145 | 566 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
Q8RY29 | 5.21e-14 | 64 | 424 | 69 | 379 | Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2 |
Q9LW07 | 1.79e-13 | 64 | 432 | 25 | 337 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.282144 | 0.705428 | 0.011168 | 0.000314 | 0.000315 | 0.000594 |
Copyright 2022 © YIN LAB, UNL. All rights reserved. Designed by Jinfang Zheng and Boyang Hu. Maintained by Yanbin Yin.