CAZyme Information: MGYG000003097_02237

Basic Information

• Species: Phocaeicola sp000436795
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp000436795
• CAZyme ID: MGYG000003097_02237
• CAZy Family: PL1
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
492	MGYG000003097_26|CGC2	53946.11	6.498

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003097	3921942	MAG	Spain	Europe

• Gene Location: Start: 32163; End: 33641 Strand: -

Full Sequence      

MKKIVMGGLCSLLLAGAVSLQAQELKSYPVPDRSKIPAFPGADGAGKYTTGGAGGQVLVV
TSLKDDGSEGTLRWALRKKGPRTIVFAVSGIIELQSSLKVSNGDVTIAGQTAPGDGICLK
NYTLGIQADNVIIRFIRSRMGADIKQKGDDAMNGFKNHRNIIIDHCSMSWSTDECATFYD
NSCFTLQWCIVSESLANSIHEKGAHGYGGIWGGQGASFHHNLLAHHTNRTPRLCGSRYTG
KPEEEKVELFNNVIYNYGSDGAYAGEGGSYNFLNNYYKPGPYTATKSSYKRLFTAYPDDG
KNNNVKGTHGVFCFSGNYIDPTCASLSDKQRQAIMKVNQDNSVGLLIKNQFAPQSELLVR
EPFNIAEHTTLQPAWDAYESVLQFAGASYRRDTYDKRIVEETRQGNYTYQGSHGSTNGMI
DQPADVGGWPEYHTEKAPVDTDADGMPDEWEKTHGLNPSDAADGRSYNLSPDYTNLEVYL
NELVQHLYPATR

Enzyme Prediction     

No EC number prediction in MGYG000003097_02237.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL1	89	277	7.3e-78	0.994535519125683

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3866	PelB	3.24e-10	1	305	1	308	Pectate lyase [Carbohydrate transport and metabolism].
smart00656	Amb_all	2.22e-04	102	269	15	175	Amb_all domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRQ55765.1	1.15e-288	1	489	1	496
SCV08373.1	1.15e-288	1	489	1	496
QGT73501.1	1.15e-288	1	489	1	496
ALJ48955.1	1.15e-288	1	489	1	496
QDM11671.1	9.43e-288	1	489	1	496

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
B8NQQ7	1.54e-48	34	488	18	418	Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83	1.57e-46	34	488	18	418	Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
A1DPF0	4.31e-45	36	488	21	419	Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q4WL88	4.31e-45	36	488	21	419	Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
Q5B297	4.40e-45	38	492	22	419	Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000260	0.999026	0.000201	0.000177	0.000156	0.000142

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003097_02237.