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CAZyme Information: MGYG000003115_00106

You are here: Home > Sequence: MGYG000003115_00106

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Franconibacter helveticus
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Franconibacter; Franconibacter helveticus
CAZyme ID MGYG000003115_00106
CAZy Family CBM73
CAZyme Description GlcNAc-binding protein A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
862 MGYG000003115_5|CGC1 92317.56 4.6872
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003115 3134352 MAG United States North America
Gene Location Start: 10634;  End: 13222  Strand: -

Full Sequence      Download help

MKRNVLARTI  SILCLCGATA  PALALEAWSG  QEGGDTYQVI  FAGNVYTNAW  WVGAANCPGS60
NDPDGPWRQV  RAATAAEITQ  YGNPANCDIS  NGAPAAKLPE  YSSAQSYQKD  DKVSSSGVSY120
KALKAISPSS  FAPGQPNPWM  AYVAVPQWQS  GKIYQQGDVV  MVNGQGYKAW  FYNVDEDPSK180
EENQNLTGDN  GQPWKPLGTL  KVWSDQELAS  APALDTQQLY  PAGSLVKFQG  QPYVSLTAVQ240
HVQPSDPSPW  GIYIDWTGTK  ERVGTPKSEW  PAHVYAPYVD  FTLNTIPDLA  SLASSKNITH300
YTLAFIVAKD  ANTCLPTWGT  AYNINDYTQY  SKIKALRDAG  GDIQVSIGGA  NNSPLAAACK360
NVNDLQQHYY  DIVDNLNLKV  LDFDIEGNWV  ADHESIQRRN  SALKMVQERW  KQEGRKVGLV420
FTLPILPTGL  TPEGIYVLED  AKAKGVELTG  VNVMTMDYGN  TVCQSSGQEG  QNIHGKCATS480
AVDNLFQQVK  KIWPDKSDSA  INNMLGTTPM  IGYNDVQGET  FYLSDARLVM  QQAQERQLGM540
IGIWSIARDQ  PGQQGYVGPE  NSGLTAQQAP  LYAFSDVFSP  FTSASSSSGG  GGGQPAPAPA600
PTPAPSNVAP  VANAGVSQTI  QGTQTVTLDG  SGSSDADGDT  LTYQWQQTGG  PDVTLNNATQ660
AHSTFTVPSP  QHAEYSFRLT  VNDGQHSAYA  DTSVTVLEAA  QPVAPLINLA  SSFQGLSGSQ720
IVITATAADP  DSMSNQLRWS  WVVPNGVGQV  SGQESNTLTI  TAASVTAAQS  FPLAVHVTDQ780
SGLSANASTT  LQINPLPQPS  GGDFQYVYPQ  NISQYKAGTR  VKGKDGNIYE  CKPFPYAGWC840
KGAAWAYAPG  EGLNWSDAWI  KR862

Enzyme Prediction      help

EC 3.2.1.14

CAZyme Signature Domains help

Created with Snap4386129172215258301344387431474517560603646689732775818811859CBM73
Family Start End Evalue family coverage
CBM73 811 859 1.2e-20 0.8888888888888888

CDD Domains      download full data without filtering help

Created with Snap4386129172215258301344387431474517560603646689732775818273579GH18_PF-ChiA-like743862PRK13211607684PKD_4295460Glyco_hydro_18610812REJ
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd06543 GH18_PF-ChiA-like 8.03e-102 273 579 1 294
PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain. Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature.
PRK13211 PRK13211 1.27e-22 743 862 347 477
N-acetylglucosamine-binding protein GbpA.
pfam18911 PKD_4 4.19e-09 607 684 9 80
PKD domain. This entry is composed of PKD domains found in bacterial surface proteins.
pfam00704 Glyco_hydro_18 3.36e-08 295 460 20 179
Glycosyl hydrolases family 18.
pfam02010 REJ 5.52e-06 610 812 86 324
REJ domain. The REJ (Receptor for Egg Jelly) domain is found in PKD1 and the sperm receptor for egg jelly. The function of this domain is unknown. The domain is 600 amino acids long so is probably composed of multiple structural domains. There are six completely conserved cysteine residues that may form disulphide bridges. This region contains tandem PKD-like domains.

CAZyme Hits      help

Created with Snap43861291722152583013443874314745175606036466897327758181862AWH90037.1|CBM5|CBM73|GH181862QBH97760.1|CBM5|CBM73|GH181862AEX53706.1|CBM5|CBM73|GH181862ADW75418.1|CBM5|CBM73|GH181862AZP43860.1|CBM5|CBM73|GH18
Hit ID E-Value Query Start Query End Hit Start Hit End
AWH90037.1 0.0 1 862 1 858
QBH97760.1 0.0 1 862 1 859
AEX53706.1 0.0 1 862 1 851
ADW75418.1 0.0 1 862 1 851
AZP43860.1 0.0 1 862 1 851

PDB Hits      download full data without filtering help

Created with Snap43861291722152583013443874314745175606036466897327758182715842DSK_A2715843A4W_A2715843A4X_A251216OGD_C
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2DSK_A 1.72e-40 271 584 8 295
Crystalstructure of catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus [Pyrococcus furiosus],2DSK_B Crystal structure of catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus [Pyrococcus furiosus]
3A4W_A 1.09e-39 271 584 8 295
Crystalstructures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus],3A4W_B Crystal structures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus]
3A4X_A 2.02e-39 271 584 8 295
Crystalstructures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus],3A4X_B Crystal structures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus],3AFB_A Crystal structures of catalytic site mutants of active domain 2 of chitinase from Pyrococcus furiosus [Pyrococcus furiosus],3AFB_B Crystal structures of catalytic site mutants of active domain 2 of chitinase from Pyrococcus furiosus [Pyrococcus furiosus]
6OGD_C 1.22e-11 25 121 24 121
Cryo-EMstructure of YenTcA in its prepore state [Yersinia entomophaga],6OGD_F Cryo-EM structure of YenTcA in its prepore state [Yersinia entomophaga],6OGD_I Cryo-EM structure of YenTcA in its prepore state [Yersinia entomophaga],6OGD_L Cryo-EM structure of YenTcA in its prepore state [Yersinia entomophaga],6OGD_O Cryo-EM structure of YenTcA in its prepore state [Yersinia entomophaga]

Swiss-Prot Hits      download full data without filtering help

Created with Snap438612917221525830134438743147451756060364668973277581824582sp|P13656|CHIA_ECOLI39551sp|O74199|CHI11_METAN263551sp|P14529|CHIT_SACEN798859sp|Q02I11|CBPD_PSEAB798859sp|Q9I589|CBPD_PSEAE
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P13656 1.78e-238 24 582 336 895
Probable bifunctional chitinase/lysozyme OS=Escherichia coli (strain K12) OX=83333 GN=chiA PE=1 SV=2
O74199 1.33e-195 39 551 1 511
Endochitinase 11 OS=Metarhizium anisopliae OX=5530 GN=chi11 PE=1 SV=1
P14529 8.72e-18 263 551 30 299
Chitinase OS=Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338) OX=405948 GN=chiA2 PE=1 SV=2
Q02I11 1.09e-15 798 859 324 386
Chitin-binding protein CbpD OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=cpbD PE=1 SV=1
Q9I589 1.09e-15 798 859 324 386
Chitin-binding protein CbpD OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=cbpD PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000303 0.999005 0.000173 0.000191 0.000159 0.000140

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003115_00106.