You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000003115_00747
You are here: Home > Sequence: MGYG000003115_00747
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Franconibacter helveticus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Franconibacter; Franconibacter helveticus | |||||||||||
| CAZyme ID | MGYG000003115_00747 | |||||||||||
| CAZy Family | PL22 | |||||||||||
| CAZyme Description | Oligogalacturonate lyase | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 1478; End: 2653 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL22 | 215 | 386 | 7.6e-80 | 0.6452830188679245 |
| PL22 | 32 | 133 | 3e-30 | 0.37735849056603776 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam14583 | Pectate_lyase22 | 0.0 | 1 | 385 | 1 | 385 | Oligogalacturonate lyase. This is a family of oligogalacturonate lyases, referred to more generally as pectate lyase family 22. These proteins fold into 7-bladed beta-propellers. |
| COG0823 | TolB | 8.08e-31 | 15 | 367 | 72 | 407 | Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport]. |
| PRK04792 | tolB | 2.68e-08 | 245 | 378 | 225 | 333 | Tol-Pal system protein TolB. |
| PRK00178 | tolB | 6.91e-08 | 245 | 378 | 206 | 314 | Tol-Pal system protein TolB. |
| PRK01029 | tolB | 2.61e-07 | 218 | 385 | 167 | 315 | Tol-Pal system protein TolB. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QAR44967.1 | 1.25e-283 | 1 | 390 | 1 | 390 |
| AST70729.1 | 1.25e-283 | 1 | 390 | 1 | 390 |
| QWR94450.1 | 2.62e-283 | 1 | 389 | 1 | 389 |
| QJT82390.1 | 3.58e-283 | 1 | 391 | 1 | 391 |
| APZ04603.1 | 5.09e-283 | 1 | 390 | 1 | 390 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3PE7_A | 2.18e-211 | 1 | 384 | 1 | 384 | Oligogalacturonatelyase in complex with manganese [Yersinia enterocolitica subsp. enterocolitica 8081] |
| 3C5M_A | 1.50e-192 | 2 | 390 | 2 | 390 | Crystalstructure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_B Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_C Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P21258 | 7.23e-205 | 1 | 384 | 1 | 384 | Oligogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=ogl PE=2 SV=2 |
| Q59418 | 4.84e-203 | 1 | 384 | 1 | 384 | Oligogalacturonide lyase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=ogl PE=4 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000065 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |