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CAZyme Information: MGYG000003116_00897

You are here: Home > Sequence: MGYG000003116_00897

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_F tepidum
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_F; Clostridium_F tepidum
CAZyme ID MGYG000003116_00897
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
499 MGYG000003116_3|CGC3 55602.49 6.7709
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003116 2461563 MAG United States North America
Gene Location Start: 172870;  End: 174369  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.14

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 36 285 5.9e-26 0.6554054054054054
CBM12 454 486 5.2e-16 0.9411764705882353

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02871 GH18_chitinase_D-like 1.84e-157 36 354 1 312
GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.
COG3469 Chi1 5.61e-60 32 351 22 325
Chitinase [Carbohydrate transport and metabolism].
pfam00704 Glyco_hydro_18 3.15e-24 38 340 2 307
Glycosyl hydrolases family 18.
smart00636 Glyco_18 1.56e-19 38 340 2 334
Glyco_18 domain.
cd12214 ChiA1_BD 3.42e-19 455 498 2 45
chitin-binding domain of Chi A1-like proteins. This group contains proteins related to the chitin binding domain of chitinase A1 (ChiA1) of Bacillus circulans WL-12. Glycosidase ChiA1 hydrolyzes chitin and is comprised of several domains: the C-terminal chitin binding domain, an N-terminal and catalytic domain, and 2 fibronectin type III-like domains. Chitinases function in invertebrates in the degradation of old exoskeletons, in fungi to utilize chitin in cell walls, and in bacteria which use chitin as an energy source. Bacillus circulans WL-12 ChiA1 facilitates invasion of fungal cell walls. The ChiAi chitin binding domain is required for the specific recognition of insoluble chitin. although topologically and structurally related, ChiA1 lacks the characteristic aromatic residues of Erwinia chrysanthemi endoglucanase Z (CBD(EGZ)).

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUN17153.1 0.0 1 499 1 499
AUM90773.1 0.0 1 499 1 499
APH20156.1 0.0 1 499 1 499
ACA55113.1 0.0 1 499 1 499
APQ77021.1 0.0 1 499 1 499

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5KZ6_A 3.59e-187 29 356 3 330
1.25Angstrom Crystal Structure of Chitinase from Bacillus anthracis. [Bacillus anthracis],5KZ6_B 1.25 Angstrom Crystal Structure of Chitinase from Bacillus anthracis. [Bacillus anthracis]
3N11_A 5.29e-186 30 356 1 327
Crystalstricture of wild-type chitinase from Bacillus cereus NCTU2 [Bacillus cereus],3N12_A Crystal stricture of chitinase in complex with zinc atoms from Bacillus cereus NCTU2 [Bacillus cereus]
3N15_A 1.51e-185 30 356 1 327
Crystalstricture of E145Q chitinase in complex with NAG from Bacillus cereus NCTU2 [Bacillus cereus]
3N17_A 6.12e-185 30 356 1 327
Crystalstricture of E145Q/Y227F chitinase in complex with NAG from Bacillus cereus NCTU2 [Bacillus cereus]
3N13_A 8.68e-185 30 356 1 327
Crystalstricture of D143A chitinase in complex with NAG from Bacillus cereus NCTU2 [Bacillus cereus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P27050 1.32e-117 33 365 187 521
Chitinase D OS=Niallia circulans OX=1397 GN=chiD PE=1 SV=4
Q05638 8.53e-87 30 355 258 596
Exochitinase 1 OS=Streptomyces olivaceoviridis OX=1921 GN=chi01 PE=1 SV=1
D4AVJ0 2.68e-79 54 358 17 331
Probable class II chitinase ARB_00204 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_00204 PE=1 SV=2
A5FB63 4.04e-58 35 355 1141 1480
Chitinase ChiA OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=chiA PE=1 SV=1
E9F7R6 1.69e-37 34 352 39 342
Endochitinase 4 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) OX=655844 GN=chi4 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000441 0.998763 0.000185 0.000216 0.000182 0.000178

TMHMM  Annotations      download full data without filtering help

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