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CAZyme Information: MGYG000003116_01320

You are here: Home > Sequence: MGYG000003116_01320

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_F tepidum
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_F; Clostridium_F tepidum
CAZyme ID MGYG000003116_01320
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
253 MGYG000003116_4|CGC3 27947.98 9.6186
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003116 2461563 MAG United States North America
Gene Location Start: 282114;  End: 282875  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003116_01320.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07486 Hydrolase_2 1.49e-40 151 251 1 100
Cell Wall Hydrolase. These enzymes have been implicated in cell wall hydrolysis, most extensively in Bacillus subtilis. For instance Bacillus subtilis steB is expressed during sporulation as an inactive form and then deposited on the cell outer cortex. During germination the the enzyme is activated and hydrolyzes the cortex. A similar role is carried out by the partially redundant Bacillus subtilis CwlJ. It is not clear whether these enzymes are amidases or peptidases.
COG3773 CwlJ 2.19e-37 115 251 96 240
Cell wall hydrolase CwlJ, involved in spore germination [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis].
PRK10783 mltD 7.74e-16 21 125 339 456
membrane-bound lytic murein transglycosylase D; Provisional
PRK06347 PRK06347 2.46e-13 25 132 330 465
1,4-beta-N-acetylmuramoylhydrolase.
PRK06347 PRK06347 1.02e-12 18 132 398 540
1,4-beta-N-acetylmuramoylhydrolase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
APF28165.1 1.46e-113 1 253 1 259
AUN21307.1 2.08e-113 1 253 1 259
QGT42834.1 8.42e-113 1 253 1 259
AUN10269.1 8.42e-113 1 253 1 259
AWB17290.1 8.42e-113 1 253 1 259

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4F55_A 8.74e-28 133 253 11 128
CrystalStructure of the Catalytic Domain of the Bacillus cereus SleB Protein [Bacillus cereus ATCC 14579]
4FET_A 1.48e-25 133 253 105 222
Catalyticdomain of germination-specific lytic tansglycosylase SleB from Bacillus anthracis [Bacillus anthracis],4FET_B Catalytic domain of germination-specific lytic tansglycosylase SleB from Bacillus anthracis [Bacillus anthracis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0A3V0 1.23e-25 133 253 142 259
Spore cortex-lytic enzyme OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=sleB PE=1 SV=1
P0A3V1 1.23e-25 133 253 142 259
Spore cortex-lytic enzyme OS=Bacillus cereus OX=1396 GN=sleB PE=1 SV=1
Q9KCE0 3.17e-24 133 251 213 328
Spore cortex-lytic enzyme OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=sleB PE=3 SV=1
P59105 6.71e-24 117 253 139 276
Spore cortex-lytic enzyme OS=Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831) OX=221109 GN=sleB PE=3 SV=1
P50739 1.11e-23 133 251 188 303
Spore cortex-lytic enzyme OS=Bacillus subtilis (strain 168) OX=224308 GN=sleB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000338 0.998648 0.000409 0.000187 0.000200 0.000175

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003116_01320.