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CAZyme Information: MGYG000003119_00164
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Capnocytophaga ochracea | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga; Capnocytophaga ochracea | |||||||||||
| CAZyme ID | MGYG000003119_00164 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 13161; End: 14711 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd01825 | SGNH_hydrolase_peri1 | 2.87e-38 | 339 | 500 | 21 | 189 | SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. |
| pfam01476 | LysM | 3.71e-13 | 235 | 277 | 1 | 43 | LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known. |
| cd00229 | SGNH_hydrolase | 4.00e-13 | 336 | 495 | 29 | 187 | SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. |
| cd00118 | LysM | 5.32e-11 | 234 | 276 | 2 | 45 | Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes. |
| pfam13472 | Lipase_GDSL_2 | 2.39e-10 | 365 | 485 | 54 | 174 | GDSL-like Lipase/Acylhydrolase family. This family of presumed lipases and related enzymes are similar to pfam00657. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ALC96316.1 | 0.0 | 1 | 516 | 1 | 516 |
| QLF51130.1 | 0.0 | 1 | 516 | 1 | 516 |
| AVM54849.1 | 0.0 | 1 | 516 | 1 | 516 |
| SNV05749.1 | 1.73e-248 | 1 | 516 | 1 | 521 |
| AMD85015.1 | 1.73e-248 | 1 | 516 | 1 | 521 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4K3U_A | 3.10e-07 | 82 | 495 | 33 | 367 | PeptidoglycanO-acetylesterase in action, 30 min [Neisseria meningitidis 4119],4K3U_B Peptidoglycan O-acetylesterase in action, 30 min [Neisseria meningitidis 4119],4K40_A Peptidoglycan O-acetylesterase in action, 0 min [Neisseria meningitidis LNP21362],4K40_B Peptidoglycan O-acetylesterase in action, 0 min [Neisseria meningitidis LNP21362],4K7J_A Peptidoglycan O-acetylesterase in action, 5 min [Neisseria meningitidis 4119],4K7J_B Peptidoglycan O-acetylesterase in action, 5 min [Neisseria meningitidis 4119] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.647733 | 0.348371 | 0.002743 | 0.000265 | 0.000222 | 0.000658 |
