logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003119_00540

You are here: Home > Sequence: MGYG000003119_00540

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Capnocytophaga ochracea
Lineage Bacteria; Bacteroidota; Bacteroidia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga; Capnocytophaga ochracea
CAZyme ID MGYG000003119_00540
CAZy Family GT5
CAZyme Description Glycogen synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
269 MGYG000003119_10|CGC2 31363.05 6.8785
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003119 2451559 MAG United States North America
Gene Location Start: 33265;  End: 34074  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003119_00540.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT5 5 237 1.9e-47 0.4703389830508475

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08323 Glyco_transf_5 8.94e-55 6 245 1 227
Starch synthase catalytic domain.
PRK14098 PRK14098 4.93e-45 5 175 7 178
starch synthase.
cd03791 GT5_Glycogen_synthase_DULL1-like 7.84e-38 5 245 1 226
Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
COG0297 GlgA 6.02e-26 5 245 2 226
Glycogen synthase [Carbohydrate transport and metabolism].
PRK00654 glgA 2.68e-25 5 228 2 205
glycogen synthase GlgA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACU93052.1 1.41e-198 1 269 1 269
ALC98153.1 1.41e-198 1 269 1 269
AVM55029.1 5.73e-198 1 269 1 269
QLF50939.1 5.73e-198 1 269 1 269
ATA80464.1 2.40e-190 1 269 1 269

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RZU_A 3.62e-09 6 193 3 180
ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZU_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens]
6GNG_A 1.02e-06 2 228 38 290
GranuleBound Starch Synthase I from Cyanophora paradoxa bound to acarbose and ADP [Cyanophora paradoxa],6GNG_B Granule Bound Starch Synthase I from Cyanophora paradoxa bound to acarbose and ADP [Cyanophora paradoxa]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B3EGV0 4.69e-42 5 198 7 201
Glycogen synthase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803 / 6330) OX=290315 GN=glgA PE=3 SV=1
B3QR00 8.97e-42 2 228 4 228
Glycogen synthase OS=Chlorobaculum parvum (strain DSM 263 / NCIMB 8327) OX=517417 GN=glgA PE=3 SV=1
Q3B6C3 1.27e-41 2 229 4 229
Glycogen synthase OS=Chlorobium luteolum (strain DSM 273 / BCRC 81028 / 2530) OX=319225 GN=glgA PE=3 SV=1
A1BIY8 1.77e-41 5 192 7 195
Glycogen synthase OS=Chlorobium phaeobacteroides (strain DSM 266) OX=290317 GN=glgA PE=3 SV=1
B4SC83 9.35e-40 5 238 7 243
Glycogen synthase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) OX=324925 GN=glgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000054 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003119_00540.