logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003134_00785

You are here: Home > Sequence: MGYG000003134_00785

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Streptococcus mitis_BB
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus mitis_BB
CAZyme ID MGYG000003134_00785
CAZy Family GT52
CAZyme Description CMP-N-acetylneuraminate:beta-galactoside alpha-2,3-sialyltransferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
292 33815.29 4.9146
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003134 1850168 MAG United States North America
Gene Location Start: 31965;  End: 32843  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003134_00785.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT52 30 266 8.3e-37 0.9239543726235742

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07922 Glyco_transf_52 7.59e-17 72 266 61 268
Glycosyltransferase family 52. This family features glycosyltransferases belonging to glycosyltransferase family 52, which have alpha-2,3- sialyltransferase (EC:4.2.99.4) and alpha-glucosyltransferase (EC 2.4.1.-) activity. For example, beta-galactoside alpha-2,3- sialyltransferase expressed by Neisseria meningitidis is a member of this family and is involved in a step of lipooligosaccharide biosynthesis requiring sialic acid transfer; these lipooligosaccharides are thought to be important in the process of pathogenesis. This family includes several bacterial lipooligosaccharide sialyltransferases similar to the Haemophilus ducreyi LST protein. Haemophilus ducreyi is the cause of the sexually transmitted disease chancroid and produces a lipooligosaccharide (LOS) containing a terminal sialyl N-acetyllactosamine trisaccharide.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQQ35414.1 4.90e-206 1 292 1 292
QBZ10969.1 7.79e-203 1 292 1 292
QGS41528.1 7.79e-203 1 292 1 292
ALD67194.1 1.29e-201 1 292 1 292
QBZ12690.1 3.55e-199 1 292 1 292

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2YK5_A 4.79e-12 3 266 3 291
Structureof Neisseria LOS-specific sialyltransferase (NST), in complex with CMP. [Neisseria meningitidis serogroup B]
2YK4_A 4.82e-12 3 266 4 292
Structureof Neisseria LOS-specific sialyltransferase (NST). [Neisseria meningitidis serogroup B]
2YK6_A 4.54e-09 3 266 3 291
Structureof Neisseria LOS-specific sialyltransferase (NST), in complex with CDP. [Neisseria meningitidis serogroup B]
2YK7_A 8.19e-09 3 266 3 291
Structureof Neisseria LOS-specific sialyltransferase (NST), in complex with CMP-3F-Neu5Ac. [Neisseria meningitidis serogroup B]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9CNC4 3.46e-20 3 251 2 265
CMP-N-acetylneuraminate:beta-galactoside alpha-2,3-sialyltransferase OS=Pasteurella multocida (strain Pm70) OX=272843 GN=lst PE=1 SV=1
Q48211 4.57e-16 3 266 2 279
N-acetyllactosaminide alpha-2,3-sialyltransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=lsgB PE=3 SV=2
P72097 5.38e-12 3 266 51 339
N-acetyllactosaminide alpha-2,3-sialyltransferase OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=lst PE=1 SV=1
Q9JUV5 7.26e-12 3 266 51 339
N-acetyllactosaminide alpha-2,3-sialyltransferase OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=lst PE=3 SV=1
P72074 6.27e-10 3 266 51 339
N-acetyllactosaminide alpha-2,3-sialyltransferase OS=Neisseria gonorrhoeae OX=485 GN=lst PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000035 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003134_00785.