logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003135_01568

You are here: Home > Sequence: MGYG000003135_01568

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cutibacterium granulosum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Propionibacteriales; Propionibacteriaceae; Cutibacterium; Cutibacterium granulosum
CAZyme ID MGYG000003135_01568
CAZy Family CBM5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
990 101481.05 4.466
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003135 2072889 MAG United States North America
Gene Location Start: 16485;  End: 19457  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003135_01568.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
NF033681 ExeM_NucH_DNase 0.0 254 820 1 545
ExeM/NucH family extracellular endonuclease.
COG2374 COG2374 1.92e-156 13 824 4 792
Predicted extracellular nuclease [General function prediction only].
NF033680 exonuc_ExeM-GG 5.74e-61 13 837 3 861
extracellular exonuclease ExeM. ExeM, as described in Shewanella oneidensis, is a biofilm formation-associated exonuclease that cleaves extracellular DNA (eDNA), a biofilm component. Members of the ExeM family contain two or three pairs of Cys residues, presumed to form disulfide bonds, and a C-terminal GlyGly-CTERM membrane-anchoring segment. Strangely, engineered removal of the GlyGly-CTERM region did not result in net export from the cell and appearance of the enzyme in culture supernatants.
cd10283 MnuA_DNase1-like 9.73e-58 499 818 1 266
Mycoplasma pulmonis MnuA nuclease-like. This subfamily includes Mycoplasma pulmonis MnuA, a membrane-associated nuclease related to Deoxyribonuclease 1 (DNase1 or DNase I, EC 3.1.21.1). The in vivo role of MnuA is as yet undetermined. This subfamily belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds.
cd04486 YhcR_OBF_like 1.96e-16 253 330 1 73
YhcR_OBF_like: A subfamily of OB-fold domains similar to the OB folds of Bacillus subtilis YhcR. YhcR is a sugar-nonspecific nuclease, which is active in the presence of Ca2+ and Mn2+. It cleaves RNA endonucleolytically, producing 3'-monophosphate nucleosides. YhcR appears to be the major Ca2+ activated nuclease of B. subtilis. YhcR may be localized in the cell wall.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QAY59561.1 6.31e-195 41 822 35 930
ACZ32093.1 2.45e-186 8 819 6 829
QAY71724.1 8.68e-185 35 819 35 839
ANC31565.1 6.51e-184 17 818 24 837
QAY64865.1 8.82e-183 14 828 21 855

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001233 0.575438 0.420430 0.002213 0.000425 0.000228

TMHMM  Annotations      download full data without filtering help

start end
7 29