You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000003137_02897
You are here: Home > Sequence: MGYG000003137_02897
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bradyrhizobium sp000015165 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Bradyrhizobium; Bradyrhizobium sp000015165 | |||||||||||
| CAZyme ID | MGYG000003137_02897 | |||||||||||
| CAZy Family | GH17 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 222302; End: 224989 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT2 | 419 | 648 | 4.9e-27 | 0.9956521739130435 |
| GH17 | 51 | 295 | 3.8e-23 | 0.9614147909967846 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd06435 | CESA_NdvC_like | 8.29e-151 | 422 | 657 | 1 | 236 | NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response. |
| COG5309 | Scw11 | 5.23e-55 | 9 | 290 | 10 | 305 | Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism]. |
| COG1215 | BcsA | 5.28e-47 | 361 | 800 | 9 | 435 | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]. |
| cd06421 | CESA_CelA_like | 7.54e-45 | 419 | 652 | 1 | 233 | CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end. |
| cd06437 | CESA_CaSu_A2 | 1.19e-39 | 419 | 649 | 1 | 232 | Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants were significantly smaller, while the single mutant plants were almost normal. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ABQ36234.1 | 0.0 | 1 | 895 | 1 | 895 |
| CAL77525.1 | 0.0 | 1 | 895 | 1 | 900 |
| SMX58588.1 | 0.0 | 1 | 895 | 1 | 900 |
| BAM89794.1 | 0.0 | 1 | 895 | 1 | 901 |
| QIP00633.1 | 0.0 | 1 | 877 | 1 | 876 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4WTP_A | 5.79e-25 | 52 | 293 | 47 | 289 | Crystalstructure of glycoside hydrolase family 17 beta-1,3-glucanosyltransferase from Rhizomucor miehei [Rhizomucor miehei CAU432] |
| 4WTR_A | 3.55e-24 | 52 | 293 | 47 | 289 | Active-sitemutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaribiose [Rhizomucor miehei CAU432],4WTS_A Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaritriose [Rhizomucor miehei CAU432] |
| 5EJ1_A | 8.60e-24 | 411 | 653 | 120 | 379 | ChainA, Putative cellulose synthase [Cereibacter sphaeroides 2.4.1] |
| 4HG6_A | 9.98e-24 | 411 | 653 | 132 | 391 | ChainA, Cellulose Synthase Subunit A [Cereibacter sphaeroides] |
| 4P00_A | 9.99e-24 | 411 | 653 | 133 | 392 | ChainA, Cellulose Synthase A subunit [Cereibacter sphaeroides 2.4.1],4P02_A Chain A, Cellulose Synthase subunit A [Cereibacter sphaeroides 2.4.1],5EIY_A Chain A, Putative cellulose synthase [Cereibacter sphaeroides 2.4.1],5EJZ_A Chain A, Putative cellulose synthase [Cereibacter sphaeroides 2.4.1] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A2YHR9 | 7.90e-24 | 414 | 654 | 223 | 469 | Putative xyloglucan glycosyltransferase 10 OS=Oryza sativa subsp. indica OX=39946 GN=CSLC10 PE=3 SV=1 |
| Q84Z01 | 7.90e-24 | 414 | 654 | 223 | 469 | Putative xyloglucan glycosyltransferase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=CSLC10 PE=3 SV=1 |
| Q9ZQB9 | 1.09e-23 | 417 | 683 | 239 | 507 | Probable xyloglucan glycosyltransferase 12 OS=Arabidopsis thaliana OX=3702 GN=CSLC12 PE=1 SV=1 |
| Q67VS7 | 4.65e-23 | 394 | 655 | 59 | 334 | Probable glucomannan 4-beta-mannosyltransferase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=CSLA9 PE=2 SV=1 |
| Q6AU53 | 1.22e-22 | 412 | 654 | 129 | 379 | Probable xyloglucan glycosyltransferase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=CSLC9 PE=2 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.484979 | 0.511903 | 0.002179 | 0.000292 | 0.000259 | 0.000377 |
TMHMM Annotations download full data without filtering help
| start | end |
|---|---|
| 305 | 327 |
| 334 | 356 |
| 360 | 382 |
| 688 | 710 |
| 714 | 736 |
| 794 | 816 |
| 820 | 842 |