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CAZyme Information: MGYG000003137_06586

You are here: Home > Sequence: MGYG000003137_06586

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bradyrhizobium sp000015165
Lineage Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Bradyrhizobium; Bradyrhizobium sp000015165
CAZyme ID MGYG000003137_06586
CAZy Family GT5
CAZyme Description Glycogen synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
506 MGYG000003137_46|CGC1 54767.49 7.7252
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003137 8388709 MAG United States North America
Gene Location Start: 31591;  End: 33111  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003137_06586.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT5 36 500 7.1e-148 0.9957627118644068

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd03791 GT5_Glycogen_synthase_DULL1-like 0.0 36 499 1 472
Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
PRK00654 glgA 0.0 36 503 2 464
glycogen synthase GlgA.
TIGR02095 glgA 0.0 36 501 2 472
glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
COG0297 GlgA 2.80e-170 36 506 2 482
Glycogen synthase [Carbohydrate transport and metabolism].
PRK14099 PRK14099 1.80e-146 36 505 5 482
glycogen synthase GlgA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACS39692.1 5.21e-248 34 503 10 479
QRM30982.1 1.97e-227 32 500 32 500
AWB20157.1 6.59e-225 16 499 14 497
ANY80208.1 7.11e-223 32 500 32 500
ABQ39820.1 1.84e-222 36 499 40 506

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3D1J_A 2.18e-126 36 499 2 473
ChainA, Glycogen synthase [Escherichia coli]
2QZS_A 7.94e-126 36 499 2 473
CrystalStructure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSb) [Escherichia coli],2R4T_A Crystal Structure of Wild-type E.coli GS in Complex with ADP and Glucose(wtGSc) [Escherichia coli],2R4U_A Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSd) [Escherichia coli],3GUH_A Crystal Structure of Wild-type E.coli GS in complex with ADP and DGM [Escherichia coli K-12]
3COP_A 6.34e-125 36 499 2 473
ChainA, Glycogen synthase [Escherichia coli],3CX4_A Chain A, Glycogen synthase [Escherichia coli]
1RZU_A 4.13e-111 37 504 3 477
ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZU_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens]
1RZV_A 9.11e-107 37 504 3 477
ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZV_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q89RJ4 1.58e-194 46 499 3 456
Glycogen synthase 1 OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=glgA1 PE=3 SV=1
Q4KCP0 9.14e-189 19 506 28 515
Glycogen synthase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=glgA PE=3 SV=2
Q4ZS46 4.14e-188 33 503 5 475
Glycogen synthase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=glgA PE=3 SV=2
Q9I1V0 5.44e-188 31 503 29 501
Glycogen synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=glgA PE=3 SV=1
Q880M9 2.29e-187 33 503 5 475
Glycogen synthase OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=glgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000050 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003137_06586.