logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003139_00434

You are here: Home > Sequence: MGYG000003139_00434

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_G cochlearium
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_G; Clostridium_G cochlearium
CAZyme ID MGYG000003139_00434
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
454 MGYG000003139_2|CGC3 51470.42 6.5043
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003139 2361241 MAG United States North America
Gene Location Start: 204067;  End: 205431  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003139_00434.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 6.24e-11 338 399 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 1.05e-05 332 399 38 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 3.31e-05 329 399 117 183
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SNV87153.1 0.0 1 454 1 454
AVP53887.1 1.98e-311 1 453 1 449
QBD85672.1 1.98e-311 1 453 1 449
QAA30635.1 1.85e-205 3 439 4 435
VTQ95559.1 9.96e-204 1 449 1 442

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000032 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003139_00434.