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CAZyme Information: MGYG000003139_02045

You are here: Home > Sequence: MGYG000003139_02045

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_G cochlearium
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_G; Clostridium_G cochlearium
CAZyme ID MGYG000003139_02045
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
491 55764.24 8.6051
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003139 2361241 MAG United States North America
Gene Location Start: 414;  End: 1889  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 339 472 3.7e-26 0.9609375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 5.17e-79 275 490 39 245
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 3.79e-28 328 476 2 141
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
pfam01832 Glucosaminidase 4.10e-13 339 421 1 76
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
COG1705 FlgJ 0.004 330 394 34 95
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SNV63668.1 0.0 1 491 1 491
QBD83984.1 3.85e-315 1 491 1 491
AVP55418.1 3.15e-314 1 491 1 491
AAO34882.1 3.15e-314 1 491 1 491
CDI48285.1 3.67e-313 1 491 1 491

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FXO_A 1.71e-49 281 490 34 244
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
4PI7_A 3.37e-46 256 476 7 210
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 2.51e-45 256 476 7 210
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
6FXP_A 1.50e-42 261 490 21 246
ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 3.34e-42 261 490 51 276
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P39848 3.35e-54 283 490 678 880
Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1
Q5HH31 2.81e-45 281 490 1046 1256
Bifunctional autolysin OS=Staphylococcus aureus (strain COL) OX=93062 GN=atl PE=3 SV=1
Q8NX96 1.70e-44 281 490 1046 1256
Bifunctional autolysin OS=Staphylococcus aureus (strain MW2) OX=196620 GN=atl PE=3 SV=1
Q6GAG0 1.70e-44 281 490 1040 1250
Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1
A7X0T9 2.29e-44 281 490 1045 1255
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) OX=418127 GN=atl PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001556 0.524056 0.472184 0.001083 0.000666 0.000427

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003139_02045.