CAZyme Information: MGYG000003147_00296

Basic Information

• Species: Robinsoniella sp900555455
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900555455
• CAZyme ID: MGYG000003147_00296
• CAZy Family: GH127
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1700	MGYG000003147_1|CGC8	188970.2	4.7025

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003147	4940098	MAG	United States	North America

• Gene Location: Start: 361812; End: 366914 Strand: -

Full Sequence      

MRKVLKKTMSVVLAASLLAGSVGAVDAAEVKSKSVRRGNADYVSNQGELITTPFVQLPVG
AVRADGWLENQLLLQKVNLTGNMHLFNDYNEATSAWLGAENGESWERGPYYMRGLVALAY
VLDDEDLKSEAQMWVEAILKSQREDGSFGAGSKTDWWAKMPVLMAMRDYYEATEAAGEPD
ERVLPFMESYFRYQQAALPNNHLSNWADARGGDNIDSVYWLYNRVYDEADPQTSDWLLDL
GNILEEQTTDWTGQYNDTTVRQHVVNTSQGMKTPAVYYQYSKNELDKNALQNGLLNMSID
HGRVDGLPNSDEAARDNRSTRGTENCGIVEGLLSSEIAEKVLGEAWIGDRIEKLAYNALP
AAYTPDMSGHVYYVLQNQVMATLGNHEFDCDHGDSSAFGAPLGFDCCYSNTHMGWPKFVQ
NMWMATENNGLALTAYGPNQVKAKVADGKTAEFVQQTDYPFKDAVHLDYKGETADFELQL
RIPEWAVDPVVKVNGTVAQGVVNGEYYKVNREWKKGDTIDLVFPSEIETSSWYNDSVAVE
KGPLLYGLKIEEDWRVEESNDARELKVEHQAQSPLREVYPASQWNYGLVVEDGFEVSYAD
EVALQPFSTQTAPVTIKATGQLIPEWTYDGNIAGPQPYGATPADESLQTDIELIPYGSGR
LRISQFPAIGEPYTDVVKAEGDSSKINHLGNTYQEFKNIMVPAAQNYTLTVEGSGQGEVI
VNNKAREAIDLSSGSATLEGLKNLIFDGNFKFTNGHYNNLRFTDGLQVDRLVVTPVNMEI
TGINIESYSRTDDYIKINTNLNAQETPYELLYKTTEEGDFTNSIIGFESQTAYITGIDPG
QDYYVQIVAKVHGEDKASDVIVLKAEEVNGGGLKPNPGAPNAQYSGFTTLNYMEDGSAGW
VKYDPGNNIRYIQDENEGRTVAKIGKNERAKMTYEPADGSAQNWTDYVVTGTVSVDEMSN
NNAGIIFRGSNFGNDPDAYAGYFAGIGRVDYNDGNVHGLGLMIGYADGQWHDIKGFSMPE
LQTNTKYDIKVVAFGDQFAVYLKAHSDADYEFIAKFSDSRFSKGTIGFRSYNEAFTAYGV
DVRPVVQEDLGVFEETEEEPGEQPGEVLFSDDFNDAQKSQENWVKVPEQANIQFVDEKVV
LGSSSDMKLVTAEQYQWKDFVYEANVTLRGEGQNAGLIFRSSKEESGADSYNGYYFGIGY
SKGKGSFEVGKAADKKWNGISGTVESSLVNQDQAHHLKVIAYGSKLNFFIDNTKVYSIAD
SSHKMGRVGLRGYNRQFEVDDINVRTLTEEEKELYSKIEVEEIAITAEAFQDGFQITYPK
TAAASYKVQYGTEPGVYTNEFVDVKFNNYKGGGVFTKDKVAFGVPLDGTYYFRLVGLSSG
QIVVAESNELMMETGYREDTSANAQRLDETKTLVSGTDTSKARPDDLARLKTAIADAEAL
QAAEGNQMDYDLASSLLTISKYAIDNRAAEPTDPGEPEEPEETEPEETDKPQETDKPQET
DKPQETEKPQETEKPVVPSKPVKKNQTISARNISKIYGTKPYKLNVKTNGDGKLSYKYDN
KKVVTISSSGKVTVRNYGKAKITIKAAATSKYNAASKTITFEVRPKKAVISKVTAEGKGR
MKVTWRKDSRVTGYQIVYAKNSKFTKGKKYFSVKNAKTITKTVSKLKKGTKYYVKVRSYK
TVKNQKYYSSYSRVKTVRIK

Enzyme Prediction     

No EC number prediction in MGYG000003147_00296.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	341	546	1.2e-25	0.3893129770992366
CBM66	1143	1281	7.8e-23	0.8451612903225807

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	8.13e-43	110	546	62	502	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	2.98e-17	306	613	270	568	Uncharacterized conserved protein, DUF1680 family [Function unknown].
cd00063	FN3	2.82e-05	1612	1698	8	92	Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
NF033909	opacity_OapA	7.86e-05	1490	1600	265	345	opacity-associated protein OapA. This family consists of full-length homologs to OapA, opacity-associated protein A as described in Haemophilus influenzae. OapA shares a C-terminal homology domain, called the OapA domain, with the Escherichia coli protein YtfB, which is now known to bind peptidoglycan through its OapA domain and to act as a cell division protein.
pfam06439	DUF1080	4.30e-04	1113	1285	6	182	Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QNF30112.1	7.22e-143	43	724	29	740
ALL07583.1	5.60e-137	39	685	25	667
QPH39723.1	4.94e-136	45	672	29	652
QJE95537.1	1.41e-135	54	674	40	653
AOM80627.1	4.35e-135	42	672	22	648

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQO_A	2.08e-12	301	549	367	609	Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000387	0.998740	0.000231	0.000253	0.000202	0.000172

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003147_00296.