CAZyme Information: MGYG000003147_03242

Basic Information

• Species: Robinsoniella sp900555455
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900555455
• CAZyme ID: MGYG000003147_03242
• CAZy Family: GH127
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
2047		227419.14	4.6304

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003147	4940098	MAG	United States	North America

• Gene Location: Start: 4856; End: 10999 Strand: -

Full Sequence      

MKRRVVSLFLTVVLTASTIFNAVIPATAATPQTNAENPQVQREGNLNYFSNQGKLNTKAF
VQLPMGAVNAKGWLLEQLYLQKNGLTGAINDEYPLYGPANGWRGGTGDGWEKGPYYLRGL
MSLAWVLDDDELKEKSMEWINFILDSQRSNGFMGPVNDGDGSSDGWDWWPRMVILQVIRD
YYEATALQGTPDERVLPFFENYFRYQLNRLPQKPLTSWAASRGGDNIEVLLWYYNHAYDE
QNPTKSDWIIELAELLAGQTKSQDSGLNWNDVFTETTVREHVVNTTQAMKTPAVLSQLPG
RENDKASLKEGIFNMGLDHGRVDKLANSDEAARDNLPYRGAELCSIVESLLSNEISIAIT
GESWLGDDMERIAYNSLPAGYAPDYNGHCYFQAQNQVMATHGNHEFDCDHGDDSAFGAPT
GFECCFPNMHMGWPKFVQNMWMATKDNGLALVMYGPNTVTAKVADGKTAVFDETTDYPFK
DTIGLDYSGDEASFPLSLRLPAWCENPVVEVNGKGMDISQADGFAVIDRNWKPGDQVTVT
FPMEVRTSVWYNNAAAVEYGPLIFSQRIEEDWRIASDDAARDIQYDSVGEFDRKEVYPAS
DWNYGLVIDPQDPESSIQIEYADEIGLQPFTLSNAPITMKVTGQKIPQWKLKGNVVPEPP
FSPIISDESLQEEIQLVPYGCTRLHMTQMPVVGDPIESGITSKTQQDSQSYQENGEKVVE
FDNVVVPSADDYTLKIYYTGSGTLRLNINGKYEEQMEFNGTEPNIVENLSSIVPGKNQYF
YFKHENYNNIRFFGNDNVNITGIDVVPVNLFTQPEIKEAISNKNGTSVTLNTNIDRSSGF
YTVKYGTESGNYTKTAENFYSKKAVITGLEPGETYYFQVSMLVNGAEKVSEEVKAESAST
QPLTFKDDFSDPAASKNKWTIYDPNHVINFQPGKMSVGVSDNIKAMTGMQEWTDYAVVAD
LIGTGNPDRDFGIILRATNVTDGSDGYNGYYVGINAVAGGLNIGYADGGWNGIATPGGVA
YEENKVYQLKTIIAGERLAVYVDGVKLYDQNISEMKSGNKPVPYYASGSAGLRSWKQSFD
VNSFEVREITAEEYEDLGIENNLFEDDFTNTEESLAKWTVLDPKDAVSFEEGQIGVGNSD
NLKIMAGTGEETWEDYAIETKLSGPENPNRDFGVMFRCTDVTAENADSYKGYYVGIDAIG
NGLNVGYANNGWNDIAKVPAFTYEPGKVYDLKILVKGSMFKVFIDGVQVYELEDDKFSYG
SVGLRSWKQPFTVNYFKVRNLTKAETDSFTNEKPDPGPPVQVTPDFQDDFEDAPASAQKW
RLCGSIDKIHFADGKLSMESNNNVKAVAGEEAWTDYVAEADVILEGKSNQNAGLMYRVTG
AGNNGSDNYCGYFFGIGNNNDGTGYYISGYADNKWHQTERKNLPAFENGRAYRLKAVAYE
DMVALYIDNQLITRFVNTRFPNGMIGLRSYEKAFSADQVVVREVTADDLTVFDEWTRYID
ETFSAHKTVQIKFPKFSPTKAYKIVYGTQPGVYTTEVYGLLHSNSGSKSDKLSVSVPDND
TDYYFRVIALDGNEEIAASGETVIHTGERYDITQDLDNLKESLTVAGNIDRNAYTQDSMF
RLDWAVANANRVLGNQNSNLIDARLAKNCIAVGINELMETEKPVVVLDHITVKPPVKTDY
FTAEDPDLKGMEVTAVYSNQTEKKLTAEEYRMTGFDTTTPGEKTVTVIYEEGAISKKGEF
KITVHEIPVPEKPDTTLLSALYQKIAAIGQGNYTAESYRNLQTALTAANKVLQNENAAQN
EINQAADDLLLAFTKLEKTTPVVPETVDKGKLQMIYDTLKNTKYNNYTAESWNNFQTALA
GAQRVLTDTKATNSQVSSAFDTLWKTSRDLTQNPPKPPVTPSLKKGAAYTYKGLKYKVTN
AVKGKETVSVTGAQKKSITSITIPSTVTLKGVKCKVTYIKSKAFKNYGKLTKVTIGSNIS
NIGSQAFYNDGKLKTITIRSNVLTKAGSKIFRGISANAKIKVPKAKRNSYKNLLKNKGQK
STVKFIW

Enzyme Prediction     

No EC number prediction in MGYG000003147_03242.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	341	564	1.4e-29	0.42366412213740456
CBM66	1141	1268	6e-20	0.7677419354838709
CBM66	939	1079	8.8e-17	0.8064516129032258

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	2.01e-43	97	565	50	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	1.17e-27	341	564	291	500	Uncharacterized conserved protein, DUF1680 family [Function unknown].
pfam13306	LRR_5	7.55e-13	1937	2024	12	88	Leucine rich repeats (6 copies). This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.
sd00036	LRR_3	1.07e-12	1936	2015	14	83	leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.
sd00036	LRR_3	1.18e-11	1936	2013	60	127	leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QJE95537.1	1.45e-154	51	695	31	651
QNF30112.1	6.95e-149	50	761	30	749
ALL07583.1	1.58e-146	41	695	21	654
ATP55412.1	9.24e-144	48	699	28	658
QPH39723.1	3.37e-141	51	695	29	652

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000473	0.998673	0.000210	0.000272	0.000194	0.000160

TMHMM  Annotations     

start	end
5	27