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CAZyme Information: MGYG000003147_03324

You are here: Home > Sequence: MGYG000003147_03324

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900555455
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900555455
CAZyme ID MGYG000003147_03324
CAZy Family GH136
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1277 MGYG000003147_27|CGC1 139218.39 4.8744
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003147 4940098 MAG United States North America
Gene Location Start: 42270;  End: 46103  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003147_03324.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH136 36 553 8.5e-112 0.9918533604887984

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5492 YjdB 9.75e-16 868 1085 123 329
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
COG5492 YjdB 1.11e-13 1004 1119 175 300
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam02368 Big_2 2.26e-13 1011 1088 1 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
pfam02368 Big_2 1.47e-11 836 913 1 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
pfam02368 Big_2 4.40e-11 927 1002 3 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QMW76217.1 0.0 24 831 22 827
QIB55915.1 0.0 24 831 22 827
QRO38181.1 0.0 1 831 1 831
QBF74993.1 0.0 1 831 1 831
ANY71259.1 7.25e-87 16 927 7 918

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7V6M_A 2.98e-56 29 558 1 579
ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
7V6I_A 3.46e-31 32 559 9 612
ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]
6KQT_A 6.09e-30 28 390 233 617
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A 5.83e-29 28 390 233 617
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P33747 4.13e-16 803 1004 5 201
Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2
P85991 1.15e-14 821 1005 79 258
Ig-like virion protein OS=Serratia phage KSP90 OX=552528 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000368 0.998896 0.000189 0.000199 0.000169 0.000151

TMHMM  Annotations      download full data without filtering help

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