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CAZyme Information: MGYG000003154_00887
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UMGS1490 sp900548185 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; UMGS1490; UMGS1490 sp900548185 | |||||||||||
| CAZyme ID | MGYG000003154_00887 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 7477; End: 8610 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 128 | 289 | 3.3e-36 | 0.7178217821782178 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3866 | PelB | 3.59e-35 | 68 | 334 | 58 | 321 | Pectate lyase [Carbohydrate transport and metabolism]. |
| smart00656 | Amb_all | 9.52e-24 | 134 | 278 | 38 | 185 | Amb_all domain. |
| pfam00544 | Pec_lyase_C | 7.23e-12 | 134 | 264 | 58 | 188 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ABG58437.1 | 4.13e-61 | 57 | 343 | 34 | 322 |
| ABQ05593.1 | 6.67e-61 | 57 | 331 | 64 | 337 |
| QSW89705.1 | 7.04e-61 | 57 | 331 | 66 | 339 |
| AXB57267.1 | 9.64e-61 | 57 | 331 | 65 | 338 |
| AOC93238.1 | 5.61e-60 | 57 | 331 | 67 | 340 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3ZSC_A | 1.10e-11 | 70 | 282 | 33 | 229 | Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
| 1VBL_A | 2.69e-09 | 157 | 265 | 190 | 302 | Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B8NBC2 | 3.52e-16 | 62 | 304 | 50 | 273 | Probable pectate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyB PE=3 SV=1 |
| Q2TZY0 | 3.52e-16 | 62 | 304 | 50 | 273 | Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1 |
| Q0CBV0 | 1.59e-15 | 62 | 304 | 49 | 272 | Probable pectate lyase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyB PE=3 SV=1 |
| Q9WYR4 | 5.60e-15 | 70 | 282 | 60 | 256 | Pectate trisaccharide-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=pelA PE=1 SV=1 |
| B1L969 | 1.00e-14 | 70 | 282 | 58 | 254 | Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=pelA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.334733 | 0.658392 | 0.003812 | 0.002098 | 0.000587 | 0.000376 |