logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003159_01164

You are here: Home > Sequence: MGYG000003159_01164

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900556285
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900556285
CAZyme ID MGYG000003159_01164
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
467 51909.62 4.8237
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003159 1716642 MAG United States North America
Gene Location Start: 18;  End: 1421  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003159_01164.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 323 464 6.7e-27 0.6968085106382979

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14200 RicinB_lectin_2 5.01e-20 361 450 2 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 1.36e-15 321 402 10 89
Ricin-type beta-trefoil lectin domain-like.
NF035929 lectin_1 1.70e-13 287 462 675 836
lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor.
cd00161 RICIN 3.32e-11 326 462 1 124
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
pfam14200 RicinB_lectin_2 2.54e-10 408 466 1 58
Ricin-type beta-trefoil lectin domain-like.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZH69735.1 2.47e-200 6 384 191 559
ADL41439.1 5.15e-11 61 195 1085 1232
ADQ05809.1 1.55e-10 61 195 937 1084
ADQ03654.1 1.57e-10 61 195 1085 1232
BCS80083.1 1.57e-10 61 195 1085 1232

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000021 0.000057 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003159_01164.