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CAZyme Information: MGYG000003162_00742

You are here: Home > Sequence: MGYG000003162_00742

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_D;
CAZyme ID MGYG000003162_00742
CAZy Family GH3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
497 54675.47 4.4513
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003162 1479112 MAG United States North America
Gene Location Start: 2461;  End: 3954  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003162_00742.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 1 88 7.1e-21 0.375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN03080 PLN03080 2.21e-93 1 467 242 753
Probable beta-xylosidase; Provisional
PRK15098 PRK15098 1.55e-78 1 459 232 728
beta-glucosidase BglX.
pfam01915 Glyco_hydro_3_C 1.74e-65 157 388 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
COG1472 BglX 9.59e-27 1 209 190 385
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 1.02e-12 1 118 196 315
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADU23372.1 2.33e-256 1 487 188 673
AEE64772.1 2.53e-253 1 487 188 673
CCO04977.1 1.31e-243 1 490 188 676
CBL34024.1 4.72e-229 1 490 188 676
CBL17962.1 7.15e-225 1 487 193 679

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5Z87_A 2.16e-68 1 468 257 757
ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
7VC7_A 2.21e-68 1 496 210 732
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC6_A 2.21e-68 1 496 210 732
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
5TF0_A 4.60e-56 5 467 219 722
CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]
5A7M_A 1.82e-54 1 479 233 739
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 2.80e-77 3 467 215 830
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
Q94KD8 4.83e-71 1 472 234 740
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
Q9SGZ5 2.43e-67 1 456 236 732
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
Q9LXA8 6.56e-66 1 467 254 766
Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana OX=3702 GN=BXL6 PE=2 SV=1
Q9FGY1 3.61e-65 1 409 240 649
Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000027 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003162_00742.