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CAZyme Information: MGYG000003163_02043

You are here: Home > Sequence: MGYG000003163_02043

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp900546645
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900546645
CAZyme ID MGYG000003163_02043
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
486 MGYG000003163_76|CGC1 54760.1 6.0189
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003163 2819390 MAG United States North America
Gene Location Start: 11198;  End: 12658  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003163_02043.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 30 469 7.5e-138 0.9577777777777777

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5520 XynC 3.38e-27 17 481 15 426
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam02055 Glyco_hydro_30 1.19e-14 41 296 1 261
Glycosyl hydrolase family 30 TIM-barrel domain.
pfam14587 Glyco_hydr_30_2 7.75e-09 139 368 121 366
O-Glycosyl hydrolase family 30.
pfam02057 Glyco_hydro_59 2.93e-05 59 266 22 192
Glycosyl hydrolase family 59.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQT78450.1 6.15e-145 30 486 35 491
QRP59665.1 6.15e-145 30 486 35 491
ASM65029.1 6.15e-145 30 486 35 491
QUU06757.1 1.34e-110 30 353 35 355
QEW35102.1 4.69e-108 30 461 44 469

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7O0E_A 3.20e-19 29 427 4 384
ChainA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
7NCX_AAA 1.19e-18 25 427 7 391
ChainAAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
6IUJ_A 1.55e-17 6 447 3 428
ChainA, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
5CXP_A 4.06e-17 31 484 7 388
X-raycrystallographic protein structure of the glycoside hydrolase family 30 subfamily 8 xylanase, Xyn30A, from Clostridium acetobutylicum [Clostridium acetobutylicum ATCC 824]
6KRL_A 4.62e-17 39 447 104 499
Crystalstructure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
G2Q1N4 8.11e-20 10 427 8 408
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
Q45070 2.80e-12 9 481 11 418
Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1
G5ECR8 4.75e-11 29 263 92 333
Putative glucosylceramidase 3 OS=Caenorhabditis elegans OX=6239 GN=gba-3 PE=3 SV=1
P17439 2.54e-10 3 428 56 480
Lysosomal acid glucosylceramidase OS=Mus musculus OX=10090 GN=Gba PE=1 SV=1
Q6YK37 6.31e-10 142 481 115 419
Glucuronoxylanase XynC OS=Bacillus subtilis OX=1423 GN=xynC PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000836 0.993248 0.005200 0.000272 0.000212 0.000194

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003163_02043.