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CAZyme Information: MGYG000003165_00500

You are here: Home > Sequence: MGYG000003165_00500

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprococcus sp900548315
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Coprococcus; Coprococcus sp900548315
CAZyme ID MGYG000003165_00500
CAZy Family CBM27
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1547 MGYG000003165_23|CGC1 165311.03 4.1218
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003165 2306754 MAG United States North America
Gene Location Start: 9433;  End: 14076  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003165_00500.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH26 743 1061 2.4e-62 0.8382838283828383
CBM23 1250 1411 1.8e-45 0.9691358024691358
CBM27 559 709 2.4e-31 0.9821428571428571

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02156 Glyco_hydro_26 4.55e-38 767 1024 24 264
Glycosyl hydrolase family 26.
COG4124 ManB2 8.29e-20 813 1090 91 352
Beta-mannanase [Carbohydrate transport and metabolism].
pfam03425 CBM_11 1.58e-06 1251 1393 7 155
Carbohydrate binding domain (family 11).
pfam09212 CBM27 2.88e-04 547 709 9 170
Carbohydrate binding module 27. Members of this family are carbohydrate binding modules that bind to beta-1, 4-manno-oligosaccharides, carob galactomannan, and konjac glucomannan, but not to cellulose (insoluble and soluble) or soluble birchwood xylan. They adopt a beta sandwich structure comprising 13 beta strands with a single, small alpha-helix and a single metal atom.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBK83362.1 0.0 1 1547 1 1544
VCV20359.1 7.88e-297 388 1446 34 1074
CBL14297.1 7.88e-297 388 1446 34 1074
CBL07467.1 9.48e-297 388 1446 34 1074
EEV00397.1 1.14e-296 388 1446 46 1086

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4YN5_A 4.78e-51 739 1116 48 414
Catalyticdomain of Bacillus sp. JAMB-750 GH26 Endo-beta-1,4-mannanase [Bacillus sp. JAMB750]
1J9Y_A 1.67e-39 737 1119 6 372
Crystalstructure of mannanase 26A from Pseudomonas cellulosa [Cellvibrio japonicus]
1R7O_A 2.08e-39 737 1119 16 382
CrystalStructure of apo-mannanase 26A from Psudomonas cellulosa [Cellvibrio japonicus]
2WHM_A 7.60e-39 737 1119 6 372
Cellvibriojaponicus Man26A E121A and E320G double mutant in complex with mannobiose [Cellvibrio japonicus]
1GW1_A 8.43e-39 737 1119 2 365
Substratedistortion by beta-mannanase from Pseudomonas cellulosa [Cellvibrio japonicus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1A278 1.24e-49 739 1386 39 653
Mannan endo-1,4-beta-mannosidase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=BAD_1030 PE=1 SV=1
P49424 2.05e-38 737 1119 44 410
Mannan endo-1,4-beta-mannosidase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=manA PE=1 SV=2
O05512 2.44e-14 746 988 35 268
Mannan endo-1,4-beta-mannosidase OS=Bacillus subtilis (strain 168) OX=224308 GN=gmuG PE=1 SV=2
Q5AWB7 7.27e-14 894 1039 181 311
Probable mannan endo-1,4-beta-mannosidase E OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=manE PE=3 SV=1
P55278 1.02e-13 872 988 144 266
Mannan endo-1,4-beta-mannosidase OS=Bacillus subtilis OX=1423 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000776 0.997906 0.000385 0.000521 0.000211 0.000181

TMHMM  Annotations      download full data without filtering help

start end
7 29
1523 1542