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CAZyme Information: MGYG000003172_00089

You are here: Home > Sequence: MGYG000003172_00089

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-485 sp900555915
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-485; CAG-485 sp900555915
CAZyme ID MGYG000003172_00089
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
872 95817.06 4.5733
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003172 1933519 MAG United States North America
Gene Location Start: 11417;  End: 14035  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 492 813 2.1e-92 0.9801980198019802

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00331 Glyco_hydro_10 2.09e-111 490 813 1 310
Glycosyl hydrolase family 10.
smart00633 Glyco_10 1.41e-97 536 811 1 263
Glycosyl hydrolase family 10.
COG3693 XynA 8.28e-71 501 812 36 338
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
TIGR02601 autotrns_rpt 0.005 240 272 1 32
autotransporter-associated beta strand repeat. This model represent a core 32-residue region of a class of bacterial protein repeat found in one to 30 copies per protein. Most proteins with a copy of this repeat have domains associated with membrane autotransporters (pfam03797, TIGR01414). The repeats occur with a periodicity of 60 to 100 residues. A pattern of sequence conservation is that every second residue is well-conserved across most of the domain. pfam05594 is based on a longer, much more poorly conserved multiple sequence alignment and hits some of the same proteins as this model with some overlap between the hit regions of the two models. It describes these repeats as likely to have a beta-helical structure. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADX05746.1 3.55e-94 548 847 7 310
AAR39815.1 2.86e-70 490 815 518 834
ADU75635.1 2.86e-70 490 815 518 834
ALX09629.1 2.86e-70 490 815 518 834
AAA23286.1 2.86e-70 490 815 518 834

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1XYZ_A 1.50e-76 490 815 28 344
ChainA, 1,4-BETA-D-XYLAN-XYLANOHYDROLASE [Acetivibrio thermocellus],1XYZ_B Chain B, 1,4-BETA-D-XYLAN-XYLANOHYDROLASE [Acetivibrio thermocellus]
6FHE_A 9.13e-62 501 811 23 338
Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct]
1I1W_A 6.88e-58 502 811 19 297
0.89AUltra high resolution structure of a Thermostable Xylanase from Thermoascus Aurantiacus [Thermoascus aurantiacus],1I1X_A 1.11 A ATOMIC RESOLUTION STRUCTURE OF A THERMOSTABLE XYLANASE FROM THERMOASCUS AURANTIACUS [Thermoascus aurantiacus]
1TA3_B 9.47e-58 487 815 2 302
CrystalStructure of xylanase (GH10) in complex with inhibitor (XIP) [Aspergillus nidulans]
2BNJ_A 1.80e-57 502 811 19 297
Thexylanase TA from Thermoascus aurantiacus utilizes arabinose decorations of xylan as significant substrate specificity determinants. [Thermoascus aurantiacus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P10478 5.73e-71 490 815 518 834
Endo-1,4-beta-xylanase Z OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=xynZ PE=1 SV=3
Q00177 1.03e-56 487 815 26 326
Endo-1,4-beta-xylanase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xlnC PE=1 SV=1
P23360 5.38e-56 502 811 45 323
Endo-1,4-beta-xylanase OS=Thermoascus aurantiacus OX=5087 GN=XYNA PE=1 SV=4
W0HFK8 5.69e-56 520 815 63 331
Endo-1,4-beta-xylanase 1 OS=Rhizopus oryzae OX=64495 GN=xyn1 PE=1 SV=1
P56588 4.42e-55 499 815 16 302
Endo-1,4-beta-xylanase OS=Penicillium simplicissimum OX=69488 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000060 0.000003 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003172_00089.