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CAZyme Information: MGYG000003172_00171

You are here: Home > Sequence: MGYG000003172_00171

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-485 sp900555915
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-485; CAG-485 sp900555915
CAZyme ID MGYG000003172_00171
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
917 98495.93 4.4892
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003172 1933519 MAG United States North America
Gene Location Start: 3829;  End: 6582  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003172_00171.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 89 269 5.5e-52 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00063 FN3 6.56e-08 462 549 3 93
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
COG3866 PelB 2.58e-07 12 299 1 316
Pectate lyase [Carbohydrate transport and metabolism].
smart00060 FN3 3.22e-06 462 536 3 81
Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
smart00656 Amb_all 2.90e-04 87 264 1 182
Amb_all domain.
pfam18884 TSP3_bac 0.001 411 432 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCP72135.1 9.26e-262 12 836 4 840
QCD38445.1 9.10e-232 12 638 4 652
QUT73817.1 1.18e-180 40 672 25 683
QUT74519.1 2.36e-165 24 769 11 738
QUT89622.1 2.61e-156 40 453 50 481

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q4WL88 2.70e-126 34 453 17 414
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B0XMA2 3.80e-126 19 453 4 414
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
A1DPF0 4.13e-125 19 453 4 414
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B8NQQ7 7.90e-125 36 453 18 413
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q0CLG7 4.34e-124 36 453 18 413
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000281 0.999010 0.000192 0.000178 0.000164 0.000146

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003172_00171.