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CAZyme Information: MGYG000003172_01466

You are here: Home > Sequence: MGYG000003172_01466

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-485 sp900555915
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-485; CAG-485 sp900555915
CAZyme ID MGYG000003172_01466
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
612 65786.04 4.973
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003172 1933519 MAG United States North America
Gene Location Start: 108;  End: 1946  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003172_01466.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 80 270 7.5e-76 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 3.75e-06 24 228 24 236
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 9.91e-06 74 273 3 166
Amb_all domain.
pfam18884 TSP3_bac 0.001 505 525 1 21
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD39200.1 2.57e-191 21 564 19 570
QCP72891.1 2.57e-191 21 564 19 570
QUT75603.1 2.05e-167 28 559 15 496
QUT77823.1 4.23e-163 28 557 51 524
QQR08040.1 1.10e-160 29 559 29 498

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5B297 7.83e-39 25 548 17 411
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
B8NQQ7 1.95e-38 25 548 17 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q0CLG7 3.31e-37 28 548 20 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
A1DPF0 8.63e-37 16 548 9 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q2UB83 4.06e-36 25 548 17 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000260 0.999065 0.000158 0.000191 0.000172 0.000152

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003172_01466.