logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003174_00090

You are here: Home > Sequence: MGYG000003174_00090

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900542125
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900542125
CAZyme ID MGYG000003174_00090
CAZy Family GH170
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
350 MGYG000003174_2|CGC1 37820.77 4.8331
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003174 2220706 MAG United States North America
Gene Location Start: 38371;  End: 39423  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003174_00090.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH170 3 349 2.3e-99 0.9914285714285714

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam19200 DUF871_N 8.27e-71 4 233 2 235
DUF871 N-terminal domain. This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.
COG3589 COG3589 6.26e-65 1 350 2 357
Uncharacterized protein [Function unknown].
pfam05913 DUF871 4.43e-25 239 350 5 116
Bacterial protein of unknown function (DUF871). This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.
COG4070 COG4070 3.39e-04 228 344 179 306
Uncharacterized protein, methanogenesis marker protein 3, UPF0288 family [Function unknown].
PRK00969 PRK00969 0.003 292 344 258 307
methanogenesis marker 3 protein.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIA33651.1 3.93e-248 1 350 1 350
ATP53905.1 4.59e-247 1 350 1 350
AZH69275.1 1.26e-244 1 350 1 350
QOY60728.1 3.04e-143 1 350 1 351
ADL06294.1 3.25e-115 1 350 1 349

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2P0O_A 2.02e-52 4 344 6 352
Crystalstructure of a conserved protein from locus EF_2437 in Enterococcus faecalis with an unknown function [Enterococcus faecalis V583]
1X7F_A 1.76e-21 2 341 28 375
Crystalstructure of an uncharacterized B. cereus protein [Bacillus cereus ATCC 14579]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A0A0H2XHV5 1.58e-30 3 342 2 336
6-phospho-N-acetylmuramidase OS=Staphylococcus aureus (strain USA300) OX=367830 GN=mupG PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000077 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003174_00090.