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CAZyme Information: MGYG000003178_01213

You are here: Home > Sequence: MGYG000003178_01213

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Klebsiella quasivariicola
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella quasivariicola
CAZyme ID MGYG000003178_01213
CAZy Family CE8
CAZyme Description Putative acyl-CoA thioester hydrolase YbhC
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
427 MGYG000003178_166|CGC1 45629.71 6.7169
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003178 3011876 MAG United States North America
Gene Location Start: 2717;  End: 4000  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003178_01213.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 91 420 9.3e-55 0.8784722222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10531 PRK10531 0.0 1 419 1 421
putative acyl-CoA thioester hydrolase.
COG4677 PemB 0.0 1 421 1 405
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02708 PLN02708 5.59e-14 69 309 216 416
Probable pectinesterase/pectinesterase inhibitor
pfam01095 Pectinesterase 1.60e-11 81 344 1 210
Pectinesterase.
PLN02916 PLN02916 6.88e-07 67 302 178 357
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASV21366.1 1.09e-309 1 427 1 427
QBL50358.1 1.09e-309 1 427 1 427
ARV41074.1 8.56e-307 1 427 1 427
QHJ15537.1 8.56e-307 1 427 1 427
AOE25425.1 8.56e-307 1 427 1 427

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3GRH_A 2.64e-225 29 427 24 422
Crystalstructure of escherichia coli ybhc [Escherichia coli K-12]
4PMH_A 1.02e-68 34 419 2 366
Thestructure of rice weevil pectin methyl esterase [Sitophilus oryzae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P46130 3.85e-242 1 427 1 427
Putative acyl-CoA thioester hydrolase YbhC OS=Escherichia coli (strain K12) OX=83333 GN=ybhC PE=1 SV=2
Q47474 6.31e-118 1 413 1 426
Pectinesterase B OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemB PE=1 SV=2
P55743 2.77e-108 35 414 5 396
Pectinesterase B OS=Pectobacterium parmentieri OX=1905730 GN=pemB PE=3 SV=2
E7CIP7 8.69e-68 34 419 18 382
Pectinesterase OS=Sitophilus oryzae OX=7048 GN=CE8-1 PE=1 SV=1
P58601 2.71e-30 39 419 30 394
Pectinesterase OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=pme PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000001 1.000022 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003178_01213.