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CAZyme Information: MGYG000003192_01107

You are here: Home > Sequence: MGYG000003192_01107

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA5416 sp900539175
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UBA5416; UBA5416 sp900539175
CAZyme ID MGYG000003192_01107
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1394 155016.03 4.4256
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003192 4033193 MAG United States North America
Gene Location Start: 8071;  End: 12255  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003192_01107.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13385 Laminin_G_3 8.39e-18 596 762 1 151
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
pfam13385 Laminin_G_3 4.38e-17 826 978 10 151
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
pfam13385 Laminin_G_3 5.74e-15 1117 1190 81 151
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
pfam05426 Alginate_lyase 2.72e-14 113 314 60 267
Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.
pfam14200 RicinB_lectin_2 1.61e-11 456 540 5 89
Ricin-type beta-trefoil lectin domain-like.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDA29257.1 2.05e-143 44 553 35 554
AHM66085.1 8.04e-142 44 553 35 554
AIY11542.1 8.04e-142 44 553 35 554
AZH29500.1 5.94e-141 44 553 35 554
QPK60353.1 1.61e-140 44 553 35 554

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P19424 8.95e-17 1207 1384 40 210
Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1
C6CRV0 2.16e-11 1218 1386 1291 1457
Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
Q06853 2.84e-07 1242 1386 492 636
Cell surface glycoprotein 2 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=Cthe_3079 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000282 0.998939 0.000194 0.000236 0.000172 0.000139

TMHMM  Annotations      download full data without filtering help

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12 31