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CAZyme Information: MGYG000003192_01143
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA5416 sp900539175 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UBA5416; UBA5416 sp900539175 | |||||||||||
| CAZyme ID | MGYG000003192_01143 | |||||||||||
| CAZy Family | GH121 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 54993; End: 60956 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH121 | 25 | 1441 | 0 | 0.9841954022988506 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam13385 | Laminin_G_3 | 3.17e-16 | 1624 | 1787 | 1 | 151 | Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily. |
| pfam00395 | SLH | 8.40e-10 | 1861 | 1903 | 1 | 42 | S-layer homology domain. |
| pfam07532 | Big_4 | 1.62e-08 | 1368 | 1428 | 1 | 59 | Bacterial Ig-like domain (group 4). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins. |
| NF033190 | inl_like_NEAT_1 | 2.93e-06 | 1861 | 1987 | 582 | 700 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| pfam07554 | FIVAR | 5.31e-06 | 1508 | 1571 | 2 | 68 | FIVAR domain. This domain is found in a wide variety of contexts, but mostly occurring in cell wall associated proteins. A lack of conserved catalytic residues suggests that it is a binding domain. From context, possible substrates are hyaluronate or fibronectin (personal obs: C Yeats). This is further evidenced by. Possibly the exact substrate is N-acetyl glucosamine. Finding it in the same protein as pfam05089 further supports this proposal. It is found in the C-terminal part of Bacillus sp. Gellan lyase, which is removed during maturation. Some of the proteins it is found in are involved in methicillin resistance. The name FIVAR derives from Found In Various Architectures. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BBF43066.1 | 0.0 | 43 | 1506 | 39 | 1509 |
| QOC94837.1 | 0.0 | 41 | 1438 | 1 | 1421 |
| AEG43573.1 | 0.0 | 34 | 1439 | 13 | 1443 |
| BCJ68460.1 | 6.51e-318 | 34 | 1438 | 23 | 1451 |
| AEB44831.1 | 6.64e-318 | 41 | 1438 | 1 | 1421 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6M5A_A | 3.84e-142 | 88 | 862 | 60 | 866 | Crystalstructure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum] |
| 5MQS_A | 9.49e-10 | 309 | 797 | 633 | 1090 | SialidaseBT_1020 [Bacteroides thetaiotaomicron] |
| 5MQR_A | 1.08e-08 | 323 | 797 | 648 | 1090 | SialidaseBT_1020 [Bacteroides thetaiotaomicron] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| E8MGH9 | 5.71e-218 | 25 | 1441 | 15 | 1466 | Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1 |
| P38536 | 2.32e-10 | 1806 | 1974 | 1687 | 1851 | Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2 |
| P38535 | 7.78e-10 | 1806 | 1974 | 913 | 1077 | Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1 |
| C6CRV0 | 4.85e-08 | 1799 | 1977 | 1282 | 1458 | Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000550 | 0.998480 | 0.000232 | 0.000310 | 0.000221 | 0.000186 |