logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003198_00217

You are here: Home > Sequence: MGYG000003198_00217

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paramuribaculum sp900759835
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Paramuribaculum; Paramuribaculum sp900759835
CAZyme ID MGYG000003198_00217
CAZy Family GH110
CAZyme Description Alpha-1,3-galactosidase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
611 MGYG000003198_14|CGC1 68194.31 8.4169
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003198 2857950 MAG United States North America
Gene Location Start: 24182;  End: 26017  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH110 36 602 1.6e-194 0.9890510948905109

CDD Domains      help

MGYG000003198_00217 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQY41174.1 1.39e-232 27 603 20 594
ABR39942.1 1.39e-232 27 603 20 594
QQY37901.1 1.39e-232 27 603 20 594
QEW37712.1 1.39e-232 27 603 20 594
ALK84513.1 5.60e-232 27 603 20 594

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 7.39e-64 20 610 17 594
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 3.79e-63 20 610 17 594
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A6L2M8 2.77e-233 27 603 20 594
Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB2 PE=3 SV=1
A6KWM0 2.04e-227 16 601 9 592
Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB1 PE=3 SV=1
Q64XV2 1.13e-222 14 601 10 595
Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaB PE=3 SV=1
Q5LGZ8 6.45e-222 14 601 10 595
Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaB PE=1 SV=1
A6LFT2 2.50e-218 36 602 30 591
Alpha-1,3-galactosidase B OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=glaB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.006933 0.704564 0.287805 0.000230 0.000218 0.000215

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003198_00217.