dbCAN-seq: a database of CAZyme sequence and annotation

You are browsing environment: HUMAN GUT

help

CAZyme Information: MGYG000003208_01687

You are here: Home > Sequence: MGYG000003208_01687

Basic Information help

Species

Pseudomonas_E extremaustralis

Lineage

Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E extremaustralis

CAZyme ID

MGYG000003208_01687

CAZy Family

GT2

CAZyme Description

Mannuronan synthase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
493	MGYG000003208_24\|CGC3	55878.58	10.3861

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003208	6254364	MAG	United States	North America

Gene Location

Start: 67284; End: 68765 Strand: -

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000003208_01687.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GT2	86	342	1e-52	0.9956521739130435

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13641	Glyco_tranf_2_3	3.33e-51	86	342	1	230	Glycosyltransferase like family 2. Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.
pfam13632	Glyco_trans_2_3	4.24e-21	182	402	1	194	Glycosyl transferase family group 2. Members of this family of prokaryotic proteins include putative glucosyltransferases, which are involved in bacterial capsule biosynthesis.
cd06434	GT2_HAS	1.14e-06	160	345	64	234	Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
COG1215	BcsA	8.78e-05	41	402	9	393	Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility].

CAZyme Hits help

Hit ID	Query Start	Query End	Hit Start	Hit End
SDF64577.1	1	493	1	493
SQF89794.1	1	493	1	493
SNY10395.1	1	493	1	493
AZF62016.1	1	493	1	493
QTV18950.1	1	493	1	493

PDB Hits help

has no PDB hit.

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q887P9	0.0	1	493	1	493	Glycosyltransferase alg8 OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=alg8 PE=3 SV=1
Q88NC5	3.35e-314	1	493	4	496	Glycosyltransferase alg8 OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=alg8 PE=3 SV=1
Q52463	1.51e-298	1	493	2	494	Mannuronan synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=alg8 PE=1 SV=2
P94199	3.91e-268	1	493	1	492	Glycosyltransferase alg8 OS=Azotobacter vinelandii OX=354 GN=alg8 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000029	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM Annotations download full data without filtering help

start	end
13	32
47	69
380	402
422	444
468	490