CAZyme Information: MGYG000003212_00535

Basic Information

• Lineage: Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; HGM11417; HGM11417
• CAZyme ID: MGYG000003212_00535
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
690	MGYG000003212_187|CGC1	78515.06	4.88

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003212	1992234	MAG	United States	North America

• Gene Location: Start: 3106; End: 5178 Strand: +

Full Sequence      

MRNFSQSKWIWQQAEAQPDEWVSFFDQLPYAGGRATVRVCADSAYALYLNGELALFGKYA
DYPDRRVYEEKEISALLKPGKNAFSLLVWYYGVSNSTYRRGEAGAIFEVTGEGGEVLLAS
GEQTLSRPAPDYRSHRCETITGQLGYNFFCDGTRYDGYREADFTAGGEYTPSRVLALPLP
QEKRPIELLELKERCPAVPVMQGAFSLFDSERTAVRLHRAMQSFCPYGEMADQPASLFGK
APTRFRTESGDGLYVVLDMGREETGYLDLEIELPEEADLFVTYGEHLLDGRVRAAIDGRN
FVVGYRGRKGINRFLSPFRRLGLRYLQIYVCCASAVVAYAGIRPTEYPVTPVPFDCKNLL
RQTVYNVSLRTLHLSMHEHYEDCPWREQALYNMDSRNQMLFGYHGFREFRFARASLLLMT
GGQRENGLLELCFPAEVSIVIPYFSLMYAVQVCEYIEYSGDQSLLGEAYPVVKRINAWFE
GRIRSGLIVNDLDPAVWNFYEWRDELCGYGNARECDVLIQAFYSLSLQSAAKLANLCGET
ADAAACLKRVQDLNERIRRTFWNEQRQMFSTYPGEEAYSQLANALCLLCGACPQEAVLAE
KLADESVDWIPATLSMMPFVYDALLKADRSRYARLILDRLDRVYLEMLRSGATSFWETEL
GAADFNDAGSLCHGWSASPVYYYQILREYL

Enzyme Prediction     

No EC number prediction in MGYG000003212_00535.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	249	682	1.1e-68	0.8551587301587301
CBM67	7	130	1.3e-16	0.7386363636363636

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	8.67e-23	354	681	6	334	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
COG3408	GDB1	6.29e-05	395	615	292	520	Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QNK57365.1	1.61e-135	1	683	1	709
AUS95627.1	1.68e-135	9	686	13	707
QGQ97405.1	2.04e-125	1	683	3	710
ARN56684.1	5.23e-105	5	686	21	711
AQQ71631.1	1.92e-94	7	682	10	687

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3CIH_A	2.43e-15	246	681	186	630	Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
2OKX_A	1.60e-12	2	113	4	119	Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000059	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003212_00535.