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CAZyme Information: MGYG000003214_03369

You are here: Home > Sequence: MGYG000003214_03369

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species NSJ-32 sp014384895
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; UBA1390; NSJ-32; NSJ-32 sp014384895
CAZyme ID MGYG000003214_03369
CAZy Family GH136
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
876 97251.22 4.22
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003214 5745180 MAG United States North America
Gene Location Start: 996;  End: 3626  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003214_03369.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH136 49 575 1.5e-151 0.9959266802443992

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 6.69e-09 757 874 189 314
alpha-L-rhamnosidase.
pfam00754 F5_F8_type_C 8.47e-08 752 851 13 114
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754 F5_F8_type_C 5.89e-06 594 702 4 114
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam17132 Glyco_hydro_106 2.64e-05 549 730 137 319
alpha-L-rhamnosidase.
cd00057 FA58C 0.006 595 690 17 105
Substituted updates: Jan 31, 2002

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ANY67173.1 9.76e-188 44 575 25 562
AXG81790.1 2.58e-152 48 701 83 774
SDT81061.1 2.28e-149 48 726 40 746
QFR01995.1 7.62e-148 48 725 61 770
QKX70716.1 3.57e-147 48 725 56 777

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7V6M_A 5.54e-60 49 575 8 576
ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
5GQC_A 1.53e-45 47 575 15 596
Crystalstructure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_C Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_D Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_E Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_F Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_G Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_H Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQF_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQF_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum]
7V6I_A 2.94e-43 46 575 10 608
ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]
6KQT_A 4.24e-32 25 446 224 654
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A 9.97e-32 25 446 224 654
CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000245 0.999093 0.000182 0.000173 0.000156 0.000135

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003214_03369.