logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003221_00474

You are here: Home > Sequence: MGYG000003221_00474

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species OM05-12 sp900760755
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; OM05-12; OM05-12 sp900760755
CAZyme ID MGYG000003221_00474
CAZy Family GH143
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1104 MGYG000003221_11|CGC1 127057.2 6.4839
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003221 3509168 MAG United States North America
Gene Location Start: 101659;  End: 104973  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003221_00474.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH143 18 569 6.8e-295 0.9910071942446043
GH142 632 1098 2.2e-227 0.9958246346555324

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13088 BNR_2 1.03e-07 264 338 168 247
BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases.
COG3408 GDB1 4.47e-04 753 991 343 588
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIU95822.1 0.0 16 1103 18 1102
QUR43134.1 0.0 17 1102 19 1101
QDH55638.1 0.0 17 1102 19 1101
QGT69949.1 0.0 17 1102 19 1101
ALJ45260.1 0.0 17 1102 19 1101

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MQR_A 0.0 21 1102 25 1103
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
5MQS_A 0.0 21 1102 25 1103
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
6M5A_A 4.64e-20 651 1101 303 810
Crystalstructure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH9 3.84e-19 651 1101 334 841
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000202 0.999231 0.000154 0.000142 0.000134 0.000127

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003221_00474.