CAZyme Information: MGYG000003237_01072

Basic Information

• Species: Victivallis sp002998355
• Lineage: Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp002998355
• CAZyme ID: MGYG000003237_01072
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
704		79388.59	6.1135

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003237	4618450	MAG	United States	North America

• Gene Location: Start: 138614; End: 140728 Strand: +

Full Sequence      

MKFIGRHTGNTVFPSPEPGEAVGLNPPPLQWVPEPGSGPYRVTVTGADGGTLFDVETERN
VFRFPAKLPAGRYRWNVRRGADERGEWAFTVPPDAVEFLPPSAEELLAALPAERPRHIYF
PEELASLAAAHPVQLAILERNVKLALEEGFMRYPDFWRAGGRTDYRSALDEVRRFLDRNT
AACALLWLFRRERRAGEYARRALLTVCEWNPAGACSVAGPWGDEVGLSIVRILPAVFDWV
YELLSPQERRWAAETLRQHARQVYGLLTEGDYFGEPGNSHSGRLPGYLGELALVLHGEIP
EEECRRWLACALDLYGSIFPHYGGRDGGWAEGPFYASSYTKWYLPFFLAVERISGFSFLV
KPFFRHVAEFFLHFAAPGMECHPFGDGHWPTESEWPGFQAQNPFGIYAERFGPELARRFS
ARCDAAIERYELHLLDVIRPEPRAPLPPESRVGTDRSYVSHDAGLASLHTCLACPERDIA
VFARASRYGTPSHQHADQGDFALLIGGQAFLAPSGSFGYQFGEPHHRIWTQQTVAANCFL
IDGEGQKKNSPEATGWMETELEREDVSRIVMHLEEAYPMLERCTRTLIFNHRTGALTVTD
EIRAAKPVAPDWRLHSYAAPEPDGAGFRIVRPAGILRFEVRGPGEAVYSAGNRYCYPNGA
AEETVPCREREPQWHMNWRFAPAKEFVIEAVFHPDCNQRRKEEC

Enzyme Prediction     

No EC number prediction in MGYG000003237_01072.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	475	601	8.4e-21	0.9477611940298507

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	8.37e-16	14	388	11	415	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	4.51e-07	491	653	37	210	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AVM44278.1	0.0	1	704	1	704
AJR05048.1	2.73e-130	13	688	13	699
ANO33566.1	5.01e-124	1	690	1	694
AYO23963.1	2.07e-119	12	616	12	618
AOM00979.1	1.91e-117	1	690	1	701

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3A0O_A	2.15e-42	25	666	37	702	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	4.11e-41	25	666	37	702	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000032	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003237_01072.