CAZyme Information: MGYG000003237_01266

Basic Information

• Species: Victivallis sp002998355
• Lineage: Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp002998355
• CAZyme ID: MGYG000003237_01266
• CAZy Family: GH78
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
788	MGYG000003237_35|CGC1	88271.63	5.8221

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003237	4618450	MAG	United States	North America

• Gene Location: Start: 39678; End: 42044 Strand: +

Full Sequence      

MANFRRVTVGRLPFWRRQAIGSWVDAGVWPAKWIALPGEPEAARTVAYRNCFTLAAPEKF
MLGVCADAVYRLWLDGEELATGPELGDVEHTYVDTYELALEAGPHALVAAVSSFGGRGPY
AKIEFRHGFLAAVDGACAAQLETNARNWQACPVPGHRFAQIPGWPGSVGQELIFDAAGYP
DGIERGEGDGWLPVTELWPGGDAELRNEFAPQPLLCPAALPDMLATPVRGWTIRYAGPDR
GRQFRIADHCSEAAARAEAELKAGGLRVPPHTKTKFLIELDDYYCVRPELVVSRGRGARI
SLGWAETLMTEEKEVRAKGWRTEWRDRYFFGIYDRFLPDGRDGMRFYTAWYRAGRFVSLE
IETAEEVLRIDRLALNEFRYPVSFESSLEFDRPELGRLAAMARRTLEMCSHDTFMDCPYY
EQLMYLGDTRIQALLTLVVSRDARLVEKALRMFAASQLESGLMQSRYPSRIRQIIPTFSP
FFIAMLGDYARWHGGPLVAELLPAARRVTDAYERWIGVDGLVRIPRSWNFVDWTGWPMGV
PPEADGGASGIVNAIHLYGVSSLAELYELTGDAVMADYFRTRARRLSDAVVKAFWRPERG
LFADTAEGNEYSEHMQAMMLLAGTLPPEIEEACGRALCEAEDLVRATVYFTFYLFEAYRK
LNRPDLFDRRLDVFREMERLGLATLLEEPEPSRSDCHAWSAHILYHFYASMLGVRPVGFG
FRAVEVRPQLPPGRTLRGRVVHPAGGTVEVEAGPGGATVVLPQHLSGTYYAPDGRAVALN
PGRNEIKG

Enzyme Prediction     

No EC number prediction in MGYG000003237_01266.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	276	765	9.6e-83	0.9702380952380952

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	5.56e-18	386	711	4	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
COG3408	GDB1	2.02e-05	428	630	288	500	Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AVM43467.1	0.0	1	788	11	798
ACZ43235.1	2.92e-220	6	782	2	784
CCW35533.1	5.73e-192	6	787	3	808
AIE86280.1	3.10e-172	6	762	2	770
ABU57036.1	7.30e-158	33	769	9	757

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2OKX_A	5.35e-36	327	751	477	916	Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]
4XHC_A	5.74e-13	393	700	214	531	ChainA, Alpha-L-rhamnosidase [Klebsiella oxytoca],4XHC_B Chain B, Alpha-L-rhamnosidase [Klebsiella oxytoca]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000043	0.000002	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003237_01266.