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CAZyme Information: MGYG000003246_00512

You are here: Home > Sequence: MGYG000003246_00512

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Borkfalkia sp900761665
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; Borkfalkia; Borkfalkia sp900761665
CAZyme ID MGYG000003246_00512
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
785 88064.51 8.255
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003246 1581010 MAG United States North America
Gene Location Start: 49676;  End: 52033  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003246_00512.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 282 755 2.7e-42 0.9305555555555556

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 1.23e-14 384 715 6 331
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHW31764.1 8.12e-173 31 766 1 761
QHT59040.1 5.01e-167 31 755 1 748
BBD46135.1 1.14e-165 34 724 49 754
AJY74261.1 1.00e-163 32 756 18 761
SCM59084.1 2.60e-160 31 724 47 755

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000050 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003246_00512.