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CAZyme Information: MGYG000003248_00359

You are here: Home > Sequence: MGYG000003248_00359

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1004 sp900761685
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; UMGS1004; UMGS1004 sp900761685
CAZyme ID MGYG000003248_00359
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1035 MGYG000003248_14|CGC1 117949.13 5.2572
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003248 2396863 MAG United States North America
Gene Location Start: 1670;  End: 4777  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003248_00359.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 14 577 1.3e-56 0.6213592233009708

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 2.23e-07 192 588 402 786
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 0.001 463 562 2 85
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CEP78513.1 2.41e-296 12 1015 9 1031
AUS98191.1 2.65e-291 16 1028 16 1042
AJG98234.1 1.29e-281 9 1019 9 1034
AEF82861.1 7.80e-275 16 1015 15 1033
QCU02329.1 3.36e-273 9 1016 7 1062

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000045 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003248_00359.