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CAZyme Information: MGYG000003248_01956

You are here: Home > Sequence: MGYG000003248_01956

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1004 sp900761685
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; UMGS1004; UMGS1004 sp900761685
CAZyme ID MGYG000003248_01956
CAZy Family CBM38
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
841 MGYG000003248_85|CGC1 92946.2 3.9343
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003248 2396863 MAG United States North America
Gene Location Start: 55397;  End: 57922  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.- 3.2.1.26

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM38 255 400 1.5e-24 0.9767441860465116
CBM38 450 591 2.7e-23 0.9689922480620154
CBM38 35 207 6.6e-23 0.9767441860465116
CBM38 639 780 4.2e-22 0.9767441860465116

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
NF033675 NTTRR-F1 0.001 33 66 6 31
NTTRR-F1 domain. NTTRR-F1 (N-terminal To Repetitive Region - Firmicutes 1) is a homology domain found strictly as the N-terminal non-repetitive region of otherwise highly repetitive proteins of various Firmicutes. The repetitive region that follows typically is collagen-like, with every third residue a glycine.
NF033675 NTTRR-F1 0.003 637 668 6 31
NTTRR-F1 domain. NTTRR-F1 (N-terminal To Repetitive Region - Firmicutes 1) is a homology domain found strictly as the N-terminal non-repetitive region of otherwise highly repetitive proteins of various Firmicutes. The repetitive region that follows typically is collagen-like, with every third residue a glycine.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AFH61270.2 6.56e-117 253 804 84 619
QJD82060.1 2.13e-116 253 804 59 594
AEI40445.1 2.23e-116 253 804 84 619
BAA24360.1 5.12e-82 446 835 58 427
CQR54046.1 1.90e-81 448 813 75 436

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000010 0.008882 0.991119 0.000003 0.000004 0.000003

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003248_01956.