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CAZyme Information: MGYG000003252_01916

You are here: Home > Sequence: MGYG000003252_01916

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp900761785
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp900761785
CAZyme ID MGYG000003252_01916
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
470 MGYG000003252_156|CGC3 52626.88 6.2714
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003252 8296673 MAG United States North America
Gene Location Start: 93440;  End: 94852  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003252_01916.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 177 455 3.7e-40 0.803076923076923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 5.59e-11 218 352 239 371
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 4.71e-06 197 451 88 307
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793 PLN02793 0.003 219 383 229 396
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNL37057.1 8.76e-315 1 470 1 470
QUT28576.1 1.41e-304 1 470 1 470
QUT82475.1 1.41e-304 1 470 1 470
QDH55088.1 1.41e-304 1 470 1 470
QGT69470.1 1.41e-304 1 470 1 470

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.441974 0.543982 0.009399 0.002670 0.000898 0.001047

TMHMM  Annotations      download full data without filtering help

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