logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003252_03688

You are here: Home > Sequence: MGYG000003252_03688

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp900761785
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp900761785
CAZyme ID MGYG000003252_03688
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
482 MGYG000003252_347|CGC1 52980.86 6.5722
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003252 8296673 MAG United States North America
Gene Location Start: 9339;  End: 10787  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003252_03688.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 194 450 2.9e-36 0.7630769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02218 PLN02218 1.63e-07 232 452 206 414
polygalacturonase ADPG
COG5434 Pgu1 6.75e-06 205 382 225 392
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.68e-05 267 453 139 310
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 4.49e-04 204 390 118 298
Probable polygalacturonase At3g15720
PLN03010 PLN03010 7.37e-04 184 460 118 383
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AAO77485.1 0.0 1 482 1 482
QQA09361.1 0.0 1 482 1 482
QMW84829.1 0.0 1 482 1 482
BCA51661.1 0.0 1 482 1 482
QUT72641.1 0.0 1 482 1 482

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DBR6 6.40e-08 173 417 162 422
Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1
Q5AYH4 2.10e-07 163 439 212 496
Probable endopolygalacturonase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000231 0.999147 0.000158 0.000153 0.000144 0.000135

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003252_03688.