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CAZyme Information: MGYG000003253_00465

You are here: Home > Sequence: MGYG000003253_00465

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species HGM11417 sp900761895
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; HGM11417; HGM11417; HGM11417 sp900761895
CAZyme ID MGYG000003253_00465
CAZy Family CBM67
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
627 70895.48 4.7726
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003253 2635273 MAG United States North America
Gene Location Start: 9751;  End: 11634  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003253_00465.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 223 620 5.1e-55 0.8353174603174603
CBM67 5 184 2e-24 0.9943181818181818

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 2.53e-17 314 620 10 339
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDU71527.1 2.92e-133 19 620 45 660
QTN32968.1 5.17e-132 19 620 209 821
ACU03186.1 2.04e-129 1 620 30 662
BBD46122.1 3.78e-129 11 620 16 629
ALJ59132.1 1.40e-126 2 619 26 652

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2OKX_A 1.48e-13 263 613 488 868
Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]
3CIH_A 1.83e-08 314 621 308 636
Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000051 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003253_00465.