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CAZyme Information: MGYG000003277_01263

You are here: Home > Sequence: MGYG000003277_01263

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Duncaniella sp900762315
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Duncaniella; Duncaniella sp900762315
CAZyme ID MGYG000003277_01263
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
499 54986.52 6.6498
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003277 3767547 MAG United States North America
Gene Location Start: 16516;  End: 18015  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003277_01263.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 206 468 1.2e-30 0.7507692307692307

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00295 Glyco_hydro_28 0.004 278 470 139 310
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCA51661.1 7.10e-222 17 499 20 482
AAO77485.1 4.08e-221 17 499 20 482
QQA09361.1 4.08e-221 17 499 20 482
QMW84829.1 4.08e-221 17 499 20 482
QUT72641.1 3.14e-218 17 499 20 482

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002268 0.996581 0.000488 0.000226 0.000206 0.000193

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003277_01263.