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CAZyme Information: MGYG000003282_01639

You are here: Home > Sequence: MGYG000003282_01639

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprobacter sp900545915
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Coprobacteraceae; Coprobacter; Coprobacter sp900545915
CAZyme ID MGYG000003282_01639
CAZy Family GH3
CAZyme Description Xylan 1,4-beta-xylosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
868 MGYG000003282_22|CGC3 97093.21 6.4549
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003282 3080391 MAG United States North America
Gene Location Start: 130612;  End: 133218  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37 3.2.1.- 3.2.1.21 3.2.1.55

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 59 304 3.1e-67 0.9814814814814815

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN03080 PLN03080 4.20e-127 1 840 1 758
Probable beta-xylosidase; Provisional
PRK15098 PRK15098 1.39e-126 4 859 2 758
beta-glucosidase BglX.
COG1472 BglX 9.38e-75 27 403 13 366
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915 Glyco_hydro_3_C 4.86e-56 375 749 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933 Glyco_hydro_3 3.74e-42 62 335 63 316
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT88122.1 0.0 1 868 1 863
ALJ60860.1 0.0 1 868 1 863
QDO68996.1 0.0 4 868 3 864
BAV07454.1 0.0 4 868 6 868
QUT77714.1 0.0 12 868 9 863

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7VC7_A 5.16e-88 28 849 17 715
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC6_A 5.16e-88 28 849 17 715
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
6Q7I_A 1.69e-86 25 849 41 737
GH3exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]
5Z87_A 7.91e-83 26 865 36 784
ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
5A7M_A 6.81e-80 35 849 51 739
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 2.04e-291 21 867 19 861
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
Q9SGZ5 1.02e-105 5 825 3 730
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
Q94KD8 3.02e-103 35 825 53 723
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
Q9FGY1 4.85e-103 36 827 59 737
Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1
T2KMH0 4.00e-102 4 868 2 723
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000688 0.789968 0.208506 0.000300 0.000288 0.000233

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003282_01639.