CAZyme Information: MGYG000003309_00403

Basic Information

• Species: Lawsonibacter sp900763995
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; Lawsonibacter; Lawsonibacter sp900763995
• CAZyme ID: MGYG000003309_00403
• CAZy Family: CBM54
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1653		179565.8	4.9873

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003309	1657705	MAG	China	Asia

• Gene Location: Start: 11502; End: 16463 Strand: +

Full Sequence      

MKLHKSGKIQKLYQRTMAMVLSVAMVLSLVVVATPTAQAASWMTGYLDKLVSWGVMRGDI
SGNLNENKTITRAEFVTMLNRAYGYEGMGENPFKDVPSTAWFADDINIAYNTGYFAGTSK
TTASPDRGLSREEAAILLAKNMMLQSGQGEVLNFTDGRQISDWSRGMVKSASNAGVISGY
PDGSFRPQNKITRGEVAVMLVNAIGTPIQKPGDYTMGSVYGNVTITSSGVTLRNTIIAGD
LYLTGGVGLGNVLLENVTVLGKIITSGAGESNEGDSSIILRNVTAKEMLVDSLNDQFVTI
RTEGDTKIDKTKVHTSAYLEDVTAADLGLMYIELDGEPNITLQLAGNIKKVMNVTLDSRL
TLAQGTAKEITMDERATNSVLTIEGGASVKNLNLDVASTVNGKGDIDHLNVNAPGSKVAM
LPDTITIRPGISADIAGESMDSAAAAESSADPKLLAGYPAAQKVAPTSAEAVFSTNKKGT
VHWAITALSDGSVSEKDLITPPAYNKKILKNGTVEMASSKKETAVKIPGLTSDGSYYLSA
VLVDARGKHSPVKVTAFTTPDDSTPKFANGYPYMSKITNTSGQVAVMPSKSCQLFWAVMP
KGSTAPTVKDFKAGAVSGNLGYGNMDVKKNIVSVFTANSQTLKELETYDLYLVLVDADGG
KDSGVKKLSFTTVDRTPPIFLTEPTVNSIKETSVGLISSLNENGTIFWVVVKQGEEYPKP
MSGQTTKPTLDSDTAKLQVANGMNALKSGKVPATASKDATITVSGLEGQVAYDLYYLAQD
KAGNYSDTVKMITIHTLDSKPPEITQEFTKTSDAEGKEPMPDTDIKIVFSEGVQDEGGEI
FVELYNTSRDTTKPQSDRDAAKLRLEQLLRQDFKLYDASTFPHTQIGGKSPTNPSAAWID
YSNVEIKMEDGKTVFRFKNGTNLHLTSGGTYYFEIFNIADTSNNKNMIKPNPQKLPEFTT
VFAKVNLQNQGISVAPQKTGQPVRVDMSFQMHPMSTGSVDSSVYYDVFLWSNSIIKFDLY
ARTVDKDGQTHTTEDAMLKQAKEAPDSNGWVYLGNVSLTPDTDGKESVGESALRTINPKG
AFPQLNSMNEGWTYEYAISLTQVGKLTNPDTWSDRVTIGVTVPAGPENSLSNLSTLINQK
TWNEYLNIGLGKGGVKSIGDPSKFEIFKQFTDTQVPKFASTYPTFEPGDAFVTMHLQLDR
PGTIYYVLAPMQGKDGRYSPSLETRDDANQEVKPKPESNGLPAMPPTSGGPDVVYPNLST
PVNLDIYQPSFSTDRIKFGTQALQTGIADVRVEGLEAETIYYAYFVLKGNSQNLSEVYCL
QFTTTNVKTPEVILDENSPKVNVTTTTPADLNWILYAYDQQFPMLKKEFSTYLKDPSDQT
WQKYFPNLAATQPTVLDALLTSITGSDRSVFDEYANETAYKEVLGRIKGEITGGVEYAGR
GELGLKENTPVPVDCTKYMTPETQYYFLAAARNTQGSIYGFKAVENVHMPDKKAPEYKSV
QTVIQLFAAEPKPDGSLNYNVPMLTWEKNPRLYAFKGSMLIEFDEPVYQLVVKAGNKKEL
VPLNTGNIVDLLGTSGEPLKLKATQVGTTITLQFEGAIHGTSIFFFNEGTISDVYSNATE
QKLKLTFNANRTSKDDPNAVLPMPAPGWEASWG

Enzyme Prediction     

No EC number prediction in MGYG000003309_00403.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM54	200	317	3.3e-23	0.9736842105263158

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00395	SLH	3.20e-10	154	196	1	42	S-layer homology domain.
NF033190	inl_like_NEAT_1	1.06e-06	93	200	582	687	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
NF033190	inl_like_NEAT_1	4.10e-06	42	204	590	752	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395	SLH	9.37e-06	93	134	1	42	S-layer homology domain.
pfam06338	ComK	7.83e-04	881	925	85	126	ComK protein. This family consists of several bacterial ComK proteins. The ComK protein of Bacillus subtilis positively regulates the transcription of several late competence genes as well as comK itself. It has been found that ClpX plays an important role in the regulation of ComK at the post-transcriptional level.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QQR07714.1	0.0	35	1624	30	1588
QIA32369.1	0.0	35	1624	30	1588
BCK84769.1	0.0	5	1651	9	1646
QQR30851.1	3.50e-235	10	1442	6	1585
ASB41592.1	3.50e-235	10	1442	6	1585

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6BT4_A	2.74e-09	93	210	26	147	Crystalstructure of the SLH domain of Sap from Bacillus anthracis in complex with a pyruvylated SCWP unit [Bacillus anthracis]
3PYW_A	2.79e-09	93	210	5	126	Thestructure of the SLH domain from B. anthracis surface array protein at 1.8A [Bacillus anthracis]
5GZT_A	7.73e-09	210	271	43	108	CrystalStructure of Chitinase ChiW from Paenibacillus sp. str. FPU-7 Reveals a Novel Type of Bacterial Cell-Surface-Expressed Multi-Modular Enzyme Machinery [Paenibacillus sp. FPU-7]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P38536	8.83e-17	41	200	1688	1851	Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
P38535	9.41e-15	41	200	914	1077	Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1
Q06852	3.01e-13	56	202	2104	2261	Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2
C6CRV0	1.05e-12	42	200	1291	1455	Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
P06546	4.72e-10	20	335	8	344	Middle cell wall protein OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) OX=358681 GN=BBR47_54160 PE=4 SV=4

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000272	0.999084	0.000169	0.000167	0.000156	0.000144

TMHMM  Annotations     

start	end
20	42