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CAZyme Information: MGYG000003312_02452

You are here: Home > Sequence: MGYG000003312_02452

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp900547205
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp900547205
CAZyme ID MGYG000003312_02452
CAZy Family CE12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
585 MGYG000003312_68|CGC1 65758.43 8.425
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003312 4657579 MAG Estonia Europe
Gene Location Start: 36099;  End: 37856  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003312_02452.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 283 555 4.6e-99 0.9444444444444444
CE12 36 267 5.1e-78 0.9952380952380953

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd01821 Rhamnogalacturan_acetylesterase_like 1.69e-87 35 267 1 198
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
PLN02773 PLN02773 6.46e-84 285 555 9 284
pectinesterase
pfam01095 Pectinesterase 1.88e-73 282 546 1 271
Pectinesterase.
PLN02682 PLN02682 2.66e-73 274 553 62 347
pectinesterase family protein
PLN02432 PLN02432 1.02e-65 285 555 15 274
putative pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIU94488.1 0.0 7 585 1 579
QRP57044.1 0.0 17 585 11 579
QQT77712.1 0.0 17 585 11 579
QUU07655.1 0.0 17 585 11 579
QQR18639.1 0.0 7 585 1 579

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1XG2_A 2.22e-41 284 546 6 274
ChainA, Pectinesterase 1 [Solanum lycopersicum]
1GQ8_A 3.23e-41 284 573 10 298
Pectinmethylesterase from Carrot [Daucus carota]
2NSP_A 2.46e-34 281 573 4 339
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
3UW0_A 6.41e-33 281 554 31 350
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
5C1E_A 1.23e-30 291 546 17 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 9.99e-61 285 553 9 282
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q8VYZ3 2.66e-54 287 553 90 361
Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1
P41510 1.20e-50 283 583 273 582
Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus OX=3708 GN=BP19 PE=2 SV=1
Q5MFV6 3.16e-49 283 583 277 586
Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana OX=3702 GN=VGDH2 PE=2 SV=2
Q42608 3.33e-49 283 583 260 569
Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris OX=3711 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.328525 0.348854 0.321338 0.000322 0.000323 0.000626

TMHMM  Annotations      download full data without filtering help

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